Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Gm42778-201ENSMUST00000199644 553 ntBASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sirpb1aA0A0A6YYP6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.58■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sirpb1aA0A0A6YYP6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.58■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms