Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.19□□□□□ -0.3
Ighv1-9A0A0A6YW37 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm10418-201ENSMUST00000100943 576 ntBASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm29791-202ENSMUST00000207888 369 ntBASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-9A0A0A6YW37 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm27405-201ENSMUST00000184201 112 ntBASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm26524-201ENSMUST00000192339 390 ntBASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Rab3c-203ENSMUST00000224180 967 ntBASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-9A0A0A6YW37 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm13148-201ENSMUST00000118892 745 ntBASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ighv1-9A0A0A6YW37 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv1-9A0A0A6YW37 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms