Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 Gm27011-201ENSMUST00000182352 972 ntBASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-4A0A075B6B4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Gm22240-201ENSMUST00000175225 82 ntBASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-4A0A075B6B4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Gm12382-201ENSMUST00000122005 922 ntBASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Gm6576-201ENSMUST00000169678 883 ntBASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-4A0A075B6B4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-4A0A075B6B4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav6-4A0A075B6B4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-4A0A075B6B4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-4A0A075B6B4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-4A0A075B6B4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Gm37292-201ENSMUST00000192062 758 ntBASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Gm43183-201ENSMUST00000200632 547 ntBASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-4A0A075B6B4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms