Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Gm2399-201ENSMUST00000104944 225 ntBASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-1A0A075B699 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-1A0A075B699 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Gm7290-201ENSMUST00000104990 617 ntBASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Gm12918-201ENSMUST00000120234 636 ntBASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Gm15710-201ENSMUST00000121821 636 ntBASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Gm5075-201ENSMUST00000196916 622 ntBASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-1A0A075B699 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9d-1A0A075B699 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms