Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Gm10493-201ENSMUST00000097270 612 ntBASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav4-4-dv10A0A075B651 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav4-4-dv10A0A075B651 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav4-4-dv10A0A075B651 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav4-4-dv10A0A075B651 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms