Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm18669-201ENSMUST00000216049 778 ntBASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8n-2A0A075B633 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8n-2A0A075B633 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8n-2A0A075B633 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8n-2A0A075B633 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8n-2A0A075B633 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trav8n-2A0A075B633 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8n-2A0A075B633 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8n-2A0A075B633 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav8n-2A0A075B633 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Trav8n-2A0A075B633 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav8n-2A0A075B633 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Gm11950-201ENSMUST00000121615 838 ntBASIC16■□□□□ 0.15
Trav8n-2A0A075B633 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Gm26039-201ENSMUST00000158152 144 ntBASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Gm28033-201ENSMUST00000184224 96 ntBASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav8n-2A0A075B633 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Gm7153-201ENSMUST00000117092 455 ntBASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav8n-2A0A075B633 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav8n-2A0A075B633 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8n-2A0A075B633 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8n-2A0A075B633 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8n-2A0A075B633 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8n-2A0A075B633 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav8n-2A0A075B633 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8n-2A0A075B633 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8n-2A0A075B633 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Trav8n-2A0A075B633 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav8n-2A0A075B633 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms