Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.53■□□□□ 0.08
Trav10nA0A075B622 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav10nA0A075B622 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav10nA0A075B622 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav10nA0A075B622 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav10nA0A075B622 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav10nA0A075B622 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav10nA0A075B622 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav10nA0A075B622 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav10nA0A075B622 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav10nA0A075B622 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav10nA0A075B622 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav10nA0A075B622 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav10nA0A075B622 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.52■□□□□ 0.08
Trav10nA0A075B622 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav10nA0A075B622 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav10nA0A075B622 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav10nA0A075B622 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav10nA0A075B622 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav10nA0A075B622 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav10nA0A075B622 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav10nA0A075B622 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav10nA0A075B622 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Gm10653-202ENSMUST00000139570 835 ntBASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav10nA0A075B622 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav10nA0A075B622 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav10nA0A075B622 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav10nA0A075B622 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav10nA0A075B622 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav10nA0A075B622 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav10nA0A075B622 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav10nA0A075B622 Gm10418-201ENSMUST00000100943 576 ntBASIC15.5■□□□□ 0.07
Trav10nA0A075B622 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.5■□□□□ 0.07
Trav10nA0A075B622 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav10nA0A075B622 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.5■□□□□ 0.07
Trav10nA0A075B622 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav10nA0A075B622 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav10nA0A075B622 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav10nA0A075B622 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav10nA0A075B622 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav10nA0A075B622 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav10nA0A075B622 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Gm13401-201ENSMUST00000117074 291 ntBASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav10nA0A075B622 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav10nA0A075B622 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav10nA0A075B622 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trav10nA0A075B622 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav10nA0A075B622 Gm18666-201ENSMUST00000190039 958 ntBASIC15.48■□□□□ 0.07
Trav10nA0A075B622 Gm42545-201ENSMUST00000202755 922 ntBASIC15.48■□□□□ 0.07
Trav10nA0A075B622 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav10nA0A075B622 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav10nA0A075B622 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav10nA0A075B622 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.48■□□□□ 0.07
Trav10nA0A075B622 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav10nA0A075B622 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms