Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Gm27405-201ENSMUST00000184201 112 ntBASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Gm38285-201ENSMUST00000192928 922 ntBASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-1A0A075B601 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Mir5133-201ENSMUST00000174955 77 ntBASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Gm44549-201ENSMUST00000208351 577 ntBASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-1A0A075B601 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav9-1A0A075B601 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Gm26524-201ENSMUST00000192339 390 ntBASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-1A0A075B601 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Zfp783-201ENSMUST00000095946 670 ntBASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-1A0A075B601 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms