Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trbv4A0A075B5I2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.54■□□□□ 0.4
Trbv4A0A075B5I2 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.54■□□□□ 0.4
Trbv4A0A075B5I2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv4A0A075B5I2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Gm29257-201ENSMUST00000186115 639 ntBASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Gm37292-201ENSMUST00000192062 758 ntBASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv4A0A075B5I2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Trbv4A0A075B5I2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv4A0A075B5I2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv4A0A075B5I2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv4A0A075B5I2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Trbv4A0A075B5I2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Trbv4A0A075B5I2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Gm12382-201ENSMUST00000122005 922 ntBASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv4A0A075B5I2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 Gm5643-201ENSMUST00000117081 966 ntBASIC17.49■□□□□ 0.39
Trbv4A0A075B5I2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms