Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm11878-201ENSMUST00000117908 400 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm13170-201ENSMUST00000119716 643 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm14559-201ENSMUST00000121745 496 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm5924-201ENSMUST00000132554 871 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm23585-201ENSMUST00000157656 102 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm26000-201ENSMUST00000157991 107 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm22726-201ENSMUST00000158089 179 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm15508-201ENSMUST00000160330 325 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm3084-201ENSMUST00000169967 598 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm6155-201ENSMUST00000173735 341 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm43580-201ENSMUST00000202892 284 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 AC134254.4-201ENSMUST00000223086 370 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Mir202-201ENSMUST00000083568 72 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trim3Q9R1R2 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm23424-201ENSMUST00000103889 110 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm15058-201ENSMUST00000117689 458 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm15180-201ENSMUST00000117745 492 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm15553-201ENSMUST00000118757 430 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm14688-201ENSMUST00000119169 303 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm23023-201ENSMUST00000158767 109 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm25810-201ENSMUST00000082752 108 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trim3Q9R1R2 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Mir105-201ENSMUST00000104655 80 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm16082-201ENSMUST00000115992 377 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm14628-201ENSMUST00000117508 635 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm12719-201ENSMUST00000118859 241 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm9078-201ENSMUST00000119126 617 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm8757-201ENSMUST00000119660 372 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Gm12577-201ENSMUST00000119701 574 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.04□□□□□ -1.76
Trim3Q9R1R2 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms