Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm22284-201ENSMUST00000104132 132 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm23744-201ENSMUST00000104231 149 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm11794-201ENSMUST00000119446 237 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm13717-201ENSMUST00000119868 365 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm12369-201ENSMUST00000121343 942 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm12872-201ENSMUST00000121835 320 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm15164-201ENSMUST00000122203 271 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm23837-201ENSMUST00000122656 286 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm24682-201ENSMUST00000158764 137 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm21399-201ENSMUST00000180210 597 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm42708-201ENSMUST00000196332 905 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm17956-201ENSMUST00000199931 838 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm44011-201ENSMUST00000203336 394 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm45438-201ENSMUST00000210242 564 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm21112-201ENSMUST00000212224 578 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm7760-201ENSMUST00000212265 578 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm7807-201ENSMUST00000212475 578 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm18587-201ENSMUST00000213736 841 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm23424-201ENSMUST00000103889 110 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm7164-201ENSMUST00000117503 450 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm14669-201ENSMUST00000118841 250 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm15106-201ENSMUST00000119691 821 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm16017-201ENSMUST00000119834 208 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm7363-201ENSMUST00000119883 399 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm11472-201ENSMUST00000121305 556 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm22839-201ENSMUST00000158436 304 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm15812-201ENSMUST00000162331 748 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm2619-202ENSMUST00000166777 651 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm27028-201ENSMUST00000182303 399 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Mir6413-201ENSMUST00000184049 108 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm28604-201ENSMUST00000186629 484 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm28566-201ENSMUST00000186714 484 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm28194-201ENSMUST00000187412 484 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm28886-202ENSMUST00000187889 484 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm28554-202ENSMUST00000189175 484 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm29213-202ENSMUST00000189703 484 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm28851-202ENSMUST00000189757 484 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm28461-201ENSMUST00000190023 484 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm37189-201ENSMUST00000192131 298 ntBASIC5.65□□□□□ -1.5
Trim39Q9ESN2 Gm42832-201ENSMUST00000196361 745 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms