Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm45439-201ENSMUST00000211723 359 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm10709-201ENSMUST00000213318 480 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm7198-201ENSMUST00000219635 1074 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Gm13733-201ENSMUST00000117290 535 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Gm15994-201ENSMUST00000118029 402 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Gm3943-201ENSMUST00000118606 718 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Gm23669-201ENSMUST00000157470 128 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Mir1945-201ENSMUST00000157919 78 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Mir3572-201ENSMUST00000175549 86 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Snora15-201ENSMUST00000177461 131 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Gm28717-201ENSMUST00000189950 315 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Gm38185-201ENSMUST00000193195 694 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Gm32447-201ENSMUST00000194265 697 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Mir219c-201ENSMUST00000199860 60 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Gm43456-201ENSMUST00000202519 457 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Gm45023-201ENSMUST00000207951 379 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 AC133156.1-202ENSMUST00000227284 363 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 AC154738.4-201ENSMUST00000228310 414 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Gm24928-201ENSMUST00000083399 107 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Gm25897-201ENSMUST00000083709 107 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.94□□□□□ -1.3
Ube3bQ9ES34 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC6.93□□□□□ -1.3
Ube3bQ9ES34 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Gm14775-201ENSMUST00000122089 310 ntBASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Gm26101-201ENSMUST00000157246 105 ntBASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Gm22650-201ENSMUST00000175138 105 ntBASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Gm4845-201ENSMUST00000179202 562 ntBASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC6.93□□□□□ -1.3
Ube3bQ9ES34 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ube3bQ9ES34 Gm43065-201ENSMUST00000198971 2092 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ube3bQ9ES34 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms