Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Lima1Q9ERG0 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Lima1Q9ERG0 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.95□□□□□ -1.78
Lima1Q9ERG0 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Lima1Q9ERG0 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Lima1Q9ERG0 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm26387-201ENSMUST00000104238 132 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm14365-201ENSMUST00000117535 587 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm15994-201ENSMUST00000118029 402 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm12103-201ENSMUST00000121892 362 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm16558-201ENSMUST00000163015 532 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm27414-201ENSMUST00000185033 381 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm6802-202ENSMUST00000186566 126 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm29428-201ENSMUST00000190086 409 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Igkv12-47-201ENSMUST00000196961 356 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm43651-201ENSMUST00000199796 439 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm18100-201ENSMUST00000200897 452 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm43371-201ENSMUST00000202838 1031 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 CU024892.1-201ENSMUST00000224869 515 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.94□□□□□ -1.78
Lima1Q9ERG0 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm14688-201ENSMUST00000119169 303 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm8757-201ENSMUST00000119660 372 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm23702-201ENSMUST00000158840 130 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm17177-201ENSMUST00000169144 483 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm25534-201ENSMUST00000175365 125 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm27190-201ENSMUST00000184890 542 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Mir6715-201ENSMUST00000184990 57 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm18117-201ENSMUST00000187720 742 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm21006-201ENSMUST00000196930 667 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm19761-201ENSMUST00000205372 391 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Lima1Q9ERG0 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Gm15076-201ENSMUST00000117076 474 ntBASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Gm5943-201ENSMUST00000119458 459 ntBASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Gm15480-201ENSMUST00000120442 519 ntBASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Gm12486-201ENSMUST00000120887 541 ntBASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.92□□□□□ -1.78
Lima1Q9ERG0 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC3.92□□□□□ -1.78
Lima1Q9ERG0 Gm5252-201ENSMUST00000189030 909 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms