Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Trim11Q99PQ2 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim11Q99PQ2 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Trim11Q99PQ2 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim11Q99PQ2 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm26396-201ENSMUST00000104093 132 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm11699-201ENSMUST00000119016 401 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm12739-201ENSMUST00000119769 382 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm16179-201ENSMUST00000120685 373 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm23499-201ENSMUST00000157736 268 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm10177-201ENSMUST00000160052 444 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Ear-ps12-201ENSMUST00000161720 451 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm17511-201ENSMUST00000172206 342 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm27699-201ENSMUST00000183553 180 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm43018-201ENSMUST00000198075 1275 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm17165-201ENSMUST00000096155 493 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.32□□□□□ -1.4
Trim11Q99PQ2 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm2223-201ENSMUST00000112099 1350 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 AC124556.1-201ENSMUST00000218256 1319 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm22019-201ENSMUST00000104359 96 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm22374-201ENSMUST00000104583 132 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm11970-201ENSMUST00000116105 320 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm14575-201ENSMUST00000117210 560 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm14835-201ENSMUST00000119039 315 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm13013-201ENSMUST00000119087 523 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm14472-201ENSMUST00000119815 282 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm14362-201ENSMUST00000121679 273 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm22959-201ENSMUST00000122514 303 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm15254-201ENSMUST00000149567 273 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm23280-201ENSMUST00000157905 139 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm24192-201ENSMUST00000157978 145 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm22261-201ENSMUST00000158691 324 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Mir5128-201ENSMUST00000175217 84 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm24810-201ENSMUST00000175317 70 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm26898-201ENSMUST00000181678 384 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm27266-201ENSMUST00000184521 123 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm28069-201ENSMUST00000189926 214 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm18553-201ENSMUST00000194152 634 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm20940-201ENSMUST00000197308 360 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm43440-201ENSMUST00000201957 729 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm44580-201ENSMUST00000206333 877 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm19921-201ENSMUST00000210505 703 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm7760-201ENSMUST00000212265 578 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm7807-201ENSMUST00000212475 578 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Gm17915-201ENSMUST00000222077 548 ntBASIC6.31□□□□□ -1.4
Trim11Q99PQ2 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms