Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Scrt1Q99M85 Gm28466-201ENSMUST00000190678 659 ntBASIC3.8□□□□□ -1.8
Scrt1Q99M85 Gm28766-201ENSMUST00000191086 234 ntBASIC3.8□□□□□ -1.8
Scrt1Q99M85 Gm38154-201ENSMUST00000195444 340 ntBASIC3.8□□□□□ -1.8
Scrt1Q99M85 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.8□□□□□ -1.8
Scrt1Q99M85 Gm43922-201ENSMUST00000205071 328 ntBASIC3.8□□□□□ -1.8
Scrt1Q99M85 Gm17811-201ENSMUST00000206193 387 ntBASIC3.8□□□□□ -1.8
Scrt1Q99M85 Gm44865-201ENSMUST00000207240 531 ntBASIC3.8□□□□□ -1.8
Scrt1Q99M85 Gm18645-202ENSMUST00000212222 760 ntBASIC3.8□□□□□ -1.8
Scrt1Q99M85 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.8□□□□□ -1.8
Scrt1Q99M85 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC3.8□□□□□ -1.8
Scrt1Q99M85 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.8□□□□□ -1.8
Scrt1Q99M85 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.8□□□□□ -1.8
Scrt1Q99M85 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.8□□□□□ -1.8
Scrt1Q99M85 AC131747.1-201ENSMUST00000226159 793 ntBASIC3.8□□□□□ -1.8
Scrt1Q99M85 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Scrt1Q99M85 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scrt1Q99M85 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Scrt1Q99M85 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scrt1Q99M85 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Scrt1Q99M85 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Scrt1Q99M85 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Scrt1Q99M85 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
Scrt1Q99M85 Gm7754-201ENSMUST00000223075 2064 ntBASIC3.8□□□□□ -1.8
Scrt1Q99M85 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Scrt1Q99M85 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scrt1Q99M85 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Scrt1Q99M85 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm29325-201ENSMUST00000190705 2528 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm15076-201ENSMUST00000117076 474 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm13341-201ENSMUST00000120780 672 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm13092-201ENSMUST00000136346 260 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm26347-201ENSMUST00000157526 131 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm22361-201ENSMUST00000158435 176 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm4557-201ENSMUST00000185826 907 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm8708-201ENSMUST00000188500 906 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm37845-201ENSMUST00000194977 355 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm18747-201ENSMUST00000198129 648 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm43559-201ENSMUST00000198755 466 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm29793-201ENSMUST00000202874 460 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm19253-201ENSMUST00000204279 307 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm2522-201ENSMUST00000204280 322 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Mir99a-201ENSMUST00000083596 65 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.79□□□□□ -1.8
Scrt1Q99M85 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Scrt1Q99M85 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Scrt1Q99M85 Gm13100-201ENSMUST00000117157 1439 ntBASIC3.78□□□□□ -1.8
Scrt1Q99M85 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.78□□□□□ -1.8
Scrt1Q99M85 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.78□□□□□ -1.8
Scrt1Q99M85 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Scrt1Q99M85 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Scrt1Q99M85 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Scrt1Q99M85 Gm24608-201ENSMUST00000104381 136 ntBASIC3.78□□□□□ -1.8
Scrt1Q99M85 Gm14385-201ENSMUST00000116315 876 ntBASIC3.78□□□□□ -1.8
Scrt1Q99M85 Gm12062-201ENSMUST00000117533 259 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms