Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm24268-201ENSMUST00000082990 110 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm26996-201ENSMUST00000204418 1359 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm13331-201ENSMUST00000117500 448 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm15428-201ENSMUST00000121352 333 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm13214-201ENSMUST00000122137 408 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC6.11□□□□□ -1.43
Clp1Q99LI9 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm25962-201ENSMUST00000157173 168 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm4557-201ENSMUST00000185826 907 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm4526-201ENSMUST00000186039 920 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm8708-201ENSMUST00000188500 906 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm28098-201ENSMUST00000191361 699 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm38050-201ENSMUST00000191904 238 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm19418-201ENSMUST00000197436 580 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 AC158807.1-201ENSMUST00000217959 187 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 AC154576.2-203ENSMUST00000224736 253 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm24037-201ENSMUST00000082871 180 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm22572-201ENSMUST00000082985 105 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm25187-201ENSMUST00000083906 133 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Clp1Q99LI9 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm44567-201ENSMUST00000205645 2631 ntBASIC6.11□□□□□ -1.43
Clp1Q99LI9 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Clp1Q99LI9 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm11386-201ENSMUST00000117761 347 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm25781-201ENSMUST00000122527 84 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm25294-201ENSMUST00000122791 104 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm23959-201ENSMUST00000157208 324 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm26486-201ENSMUST00000158021 110 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm20545-201ENSMUST00000174739 210 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm25019-201ENSMUST00000179732 110 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm9320-201ENSMUST00000184151 473 ntBASIC6.1□□□□□ -1.43
Clp1Q99LI9 Gm28283-201ENSMUST00000185509 178 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms