Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm28843-201ENSMUST00000189198 678 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm28151-201ENSMUST00000189404 951 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm29213-202ENSMUST00000189703 484 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm28851-202ENSMUST00000189757 484 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm28461-201ENSMUST00000190023 484 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm28404-201ENSMUST00000190242 453 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm29454-201ENSMUST00000190805 393 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm29546-201ENSMUST00000191171 678 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm6719-201ENSMUST00000202067 335 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm45870-201ENSMUST00000211269 601 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm7128-201ENSMUST00000211639 533 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm35262-201ENSMUST00000215133 267 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 AC131677.1-201ENSMUST00000218721 535 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 AC115750.1-201ENSMUST00000220441 567 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 AC102575.1-201ENSMUST00000225348 547 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm7808-201ENSMUST00000082002 387 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm23506-201ENSMUST00000083077 107 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Mir449a-201ENSMUST00000083641 91 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
Ndc1Q8VCB1 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm12850-201ENSMUST00000119210 436 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm14159-201ENSMUST00000119832 451 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm7071-201ENSMUST00000120458 462 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm11369-201ENSMUST00000120812 318 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm16428-201ENSMUST00000121193 723 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm15428-201ENSMUST00000121352 333 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm14366-201ENSMUST00000121970 730 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm25291-201ENSMUST00000122795 144 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm25334-201ENSMUST00000158036 110 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm23583-201ENSMUST00000158533 289 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm26950-201ENSMUST00000182734 498 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Mir6541-201ENSMUST00000183649 110 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm27676-201ENSMUST00000183669 61 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm27332-201ENSMUST00000184893 112 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm43724-201ENSMUST00000197516 226 ntBASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ndc1Q8VCB1 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 109.7 ms