Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Gm43044-201ENSMUST00000198091 379 ntBASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Gm6303-201ENSMUST00000210123 471 ntBASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Gm18320-201ENSMUST00000211304 595 ntBASIC3.97□□□□□ -1.77
Lsm1Q8VC85 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Gm6863-201ENSMUST00000052882 636 ntBASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Gm6462-201ENSMUST00000081488 304 ntBASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Gm23928-201ENSMUST00000082469 145 ntBASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Rnu3a-201ENSMUST00000083936 214 ntBASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Gm43990-201ENSMUST00000203790 1691 ntBASIC3.97□□□□□ -1.77
Lsm1Q8VC85 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.96□□□□□ -1.77
Lsm1Q8VC85 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.77
Lsm1Q8VC85 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Lsm1Q8VC85 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.96□□□□□ -1.77
Lsm1Q8VC85 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.96□□□□□ -1.77
Lsm1Q8VC85 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm13733-201ENSMUST00000117290 535 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm11698-201ENSMUST00000117948 455 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm15916-201ENSMUST00000118355 736 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm12387-201ENSMUST00000118573 955 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm14933-201ENSMUST00000118840 481 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm5123-201ENSMUST00000121905 837 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm24380-201ENSMUST00000122696 324 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm22453-201ENSMUST00000122801 318 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm11281-201ENSMUST00000141391 576 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm5755-201ENSMUST00000152394 837 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm25908-201ENSMUST00000157624 98 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm27535-201ENSMUST00000183814 157 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm43476-201ENSMUST00000197873 405 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm44032-201ENSMUST00000204841 166 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Lsm1Q8VC85 AC154184.1-201ENSMUST00000224375 1620 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm14365-201ENSMUST00000117535 587 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm11387-201ENSMUST00000120266 772 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm11910-201ENSMUST00000121624 432 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm10074-201ENSMUST00000174543 249 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm26460-201ENSMUST00000175061 126 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm14527-201ENSMUST00000179300 639 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm27580-201ENSMUST00000183666 149 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm27718-201ENSMUST00000183721 86 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm28574-201ENSMUST00000185757 699 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm28781-201ENSMUST00000185760 696 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm28339-201ENSMUST00000185845 696 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm29062-201ENSMUST00000186032 694 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm29574-201ENSMUST00000186226 696 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm28828-201ENSMUST00000186601 696 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm28057-201ENSMUST00000186603 615 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm28255-201ENSMUST00000187101 694 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm29307-201ENSMUST00000187367 696 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm28397-201ENSMUST00000187970 699 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm28896-201ENSMUST00000188609 696 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm29545-201ENSMUST00000188878 694 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm29196-201ENSMUST00000189239 618 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm29339-201ENSMUST00000189613 696 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm28159-201ENSMUST00000190296 696 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm29366-201ENSMUST00000190481 699 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm29407-201ENSMUST00000191468 696 ntBASIC3.95□□□□□ -1.78
Lsm1Q8VC85 Gm37433-201ENSMUST00000192695 678 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms