Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm23408-201ENSMUST00000158523 265 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Mir3097-201ENSMUST00000175356 67 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm28666-201ENSMUST00000186649 274 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Mir7227-201ENSMUST00000200408 59 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm44125-201ENSMUST00000203068 448 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm44063-201ENSMUST00000203307 376 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm44431-201ENSMUST00000203500 413 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 AC167229.1-201ENSMUST00000220057 469 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 AC132315.1-201ENSMUST00000221771 390 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 AC154592.1-201ENSMUST00000225784 574 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm38032-201ENSMUST00000195052 1589 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm24640-201ENSMUST00000116949 126 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm22626-201ENSMUST00000116990 126 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm12245-201ENSMUST00000117266 357 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm13733-201ENSMUST00000117290 535 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm15215-201ENSMUST00000117773 489 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm12512-201ENSMUST00000119620 217 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm15801-201ENSMUST00000120920 522 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm25362-201ENSMUST00000158854 105 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm25445-201ENSMUST00000158996 299 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm8783-201ENSMUST00000159764 522 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm25194-201ENSMUST00000177987 79 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm24761-201ENSMUST00000179589 127 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm24488-201ENSMUST00000179934 127 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm25701-201ENSMUST00000179988 127 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm26431-201ENSMUST00000180199 127 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm23144-201ENSMUST00000180226 107 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm28263-201ENSMUST00000185884 400 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm29124-201ENSMUST00000186576 452 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm32447-201ENSMUST00000194265 697 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm43142-201ENSMUST00000198670 361 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm42961-201ENSMUST00000202023 181 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm44059-201ENSMUST00000204048 351 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm44513-201ENSMUST00000206811 439 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm44859-201ENSMUST00000207831 94 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm45405-201ENSMUST00000211544 609 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm18541-201ENSMUST00000215935 538 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 AC121966.1-201ENSMUST00000221458 282 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm24928-201ENSMUST00000083399 107 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm25897-201ENSMUST00000083709 107 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm23731-201ENSMUST00000083749 107 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm26163-201ENSMUST00000083792 178 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Trim47Q8C0E3 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm14125-201ENSMUST00000113442 680 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm7846-201ENSMUST00000145844 274 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm22867-201ENSMUST00000157499 109 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm25643-201ENSMUST00000158874 103 ntBASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Trim47Q8C0E3 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms