Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm28061-201ENSMUST00000189085 807 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm37503-201ENSMUST00000192088 319 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm38019-201ENSMUST00000195133 380 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm43675-201ENSMUST00000199468 1184 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm7825-201ENSMUST00000204046 416 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC6.24□□□□□ -1.41
Trim56Q80VI1 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim56Q80VI1 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm11360-201ENSMUST00000221898 262 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 AC165953.1-201ENSMUST00000226386 357 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm23623-201ENSMUST00000082461 107 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm19136-201ENSMUST00000190706 2067 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm25213-201ENSMUST00000102388 113 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm12837-201ENSMUST00000120131 373 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm13077-201ENSMUST00000121941 484 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm26350-201ENSMUST00000157531 288 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm25865-201ENSMUST00000158247 104 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm16101-201ENSMUST00000160695 430 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm22776-201ENSMUST00000178634 94 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm23767-201ENSMUST00000179278 94 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm17929-201ENSMUST00000186851 627 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm29454-201ENSMUST00000190805 393 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm42542-201ENSMUST00000197978 268 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm43026-201ENSMUST00000202972 325 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm18007-201ENSMUST00000205019 844 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm45422-201ENSMUST00000211476 246 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm2628-201ENSMUST00000218019 426 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm20368-201ENSMUST00000220716 301 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm3565-201ENSMUST00000222670 609 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 AC125539.2-201ENSMUST00000228339 753 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Clec2j-201ENSMUST00000032517 515 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim56Q80VI1 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim56Q80VI1 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Mir133b-201ENSMUST00000083546 119 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm37766-201ENSMUST00000192244 2567 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm6503-201ENSMUST00000210829 2225 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.23□□□□□ -1.41
Trim56Q80VI1 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim56Q80VI1 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm13379-201ENSMUST00000118053 621 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm12717-201ENSMUST00000118427 983 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm14159-201ENSMUST00000119832 451 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm13435-201ENSMUST00000120111 1023 ntBASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.22□□□□□ -1.41
Trim56Q80VI1 Gm24901-201ENSMUST00000158125 110 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms