Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm43924-201ENSMUST00000204851 1736 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm26300-201ENSMUST00000102282 94 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm24079-201ENSMUST00000104352 132 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm14842-201ENSMUST00000119577 269 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm15480-201ENSMUST00000120442 519 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm14970-201ENSMUST00000122289 355 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm8061-201ENSMUST00000122380 350 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm25439-201ENSMUST00000158280 131 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm22160-201ENSMUST00000158405 328 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm27694-201ENSMUST00000184740 86 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm19029-201ENSMUST00000189923 564 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm38046-201ENSMUST00000192733 550 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm32175-201ENSMUST00000193641 346 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Ighv12-1-201ENSMUST00000195542 329 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 AC162387.1-201ENSMUST00000213369 213 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 AC160016.1-201ENSMUST00000215589 448 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm18247-201ENSMUST00000222937 601 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm15101-201ENSMUST00000178818 1502 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sh3rf1Q69ZI1 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm16431-201ENSMUST00000117454 431 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm15331-201ENSMUST00000120225 385 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.72□□□□□ -1.49
Sh3rf1Q69ZI1 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms