Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm38146-201ENSMUST00000194121 1293 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm30638-201ENSMUST00000195570 656 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm36728-201ENSMUST00000195782 665 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm44946-201ENSMUST00000208425 572 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim28Q62318 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC5.97□□□□□ -1.45
Trim28Q62318 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm9616-201ENSMUST00000221154 781 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim28Q62318 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim28Q62318 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Trim28Q62318 Gm23875-201ENSMUST00000083711 318 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm22578-201ENSMUST00000083730 107 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Trim28Q62318 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim28Q62318 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim28Q62318 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim28Q62318 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim28Q62318 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim28Q62318 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim28Q62318 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim28Q62318 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Trim28Q62318 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.45
Trim28Q62318 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.96□□□□□ -1.45
Trim28Q62318 Gm45262-201ENSMUST00000209917 1463 ntBASIC5.96□□□□□ -1.45
Trim28Q62318 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.96□□□□□ -1.45
Trim28Q62318 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim28Q62318 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim28Q62318 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Trim28Q62318 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim28Q62318 Mir761-201ENSMUST00000103245 76 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Igkv11-106-201ENSMUST00000103331 346 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm10936-201ENSMUST00000105264 252 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm15385-201ENSMUST00000118725 667 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm15785-201ENSMUST00000119145 694 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm14989-201ENSMUST00000120497 207 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm16053-201ENSMUST00000120511 188 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim28Q62318 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim28Q62318 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim28Q62318 Gm25913-201ENSMUST00000157617 135 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm22211-201ENSMUST00000158097 156 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm19203-201ENSMUST00000174049 939 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Rab26os-201ENSMUST00000176215 477 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm21758-201ENSMUST00000179336 819 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Trim28Q62318 Gm27414-201ENSMUST00000185033 381 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm28615-201ENSMUST00000187527 482 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm28597-201ENSMUST00000187664 666 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm29639-201ENSMUST00000188375 580 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm29647-201ENSMUST00000188795 666 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm28337-201ENSMUST00000190425 666 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm28504-201ENSMUST00000190977 666 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm31511-201ENSMUST00000193134 657 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm37272-201ENSMUST00000193401 488 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm35843-201ENSMUST00000193716 666 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm8861-201ENSMUST00000196346 832 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm7946-201ENSMUST00000203326 958 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Gm18691-201ENSMUST00000203593 872 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 AC102369.1-201ENSMUST00000218415 373 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim28Q62318 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Trim28Q62318 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Trim28Q62318 Gm24207-201ENSMUST00000082781 108 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim28Q62318 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Trim28Q62318 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim28Q62318 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Trim28Q62318 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Trim28Q62318 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim28Q62318 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC5.96□□□□□ -1.46
Trim28Q62318 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim28Q62318 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trim28Q62318 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim28Q62318 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.95□□□□□ -1.46
Trim28Q62318 Gm12636-201ENSMUST00000117395 624 ntBASIC5.95□□□□□ -1.46
Trim28Q62318 Gm14007-201ENSMUST00000118288 210 ntBASIC5.95□□□□□ -1.46
Trim28Q62318 Gm13359-201ENSMUST00000119000 695 ntBASIC5.95□□□□□ -1.46
Trim28Q62318 Gm11359-201ENSMUST00000120039 567 ntBASIC5.95□□□□□ -1.46
Trim28Q62318 Gm14619-201ENSMUST00000120480 168 ntBASIC5.95□□□□□ -1.46
Trim28Q62318 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC5.95□□□□□ -1.46
Trim28Q62318 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC5.95□□□□□ -1.46
Trim28Q62318 Gm6650-201ENSMUST00000166710 614 ntBASIC5.95□□□□□ -1.46
Trim28Q62318 Atp2b4-208ENSMUST00000167348 243 ntBASIC5.95□□□□□ -1.46
Trim28Q62318 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC5.95□□□□□ -1.46
Trim28Q62318 Gm2617-201ENSMUST00000185690 1066 ntBASIC5.95□□□□□ -1.46
Trim28Q62318 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.95□□□□□ -1.46
Trim28Q62318 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC5.95□□□□□ -1.46
Trim28Q62318 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.95□□□□□ -1.46
Trim28Q62318 Gm31532-201ENSMUST00000203555 767 ntBASIC5.95□□□□□ -1.46
Trim28Q62318 Gm44779-201ENSMUST00000206937 708 ntBASIC5.95□□□□□ -1.46
Trim28Q62318 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trim28Q62318 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.95□□□□□ -1.46
Trim28Q62318 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Trim28Q62318 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms