Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm14172-201ENSMUST00000118255 644 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm12252-201ENSMUST00000119517 219 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm15103-201ENSMUST00000119893 871 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm12849-201ENSMUST00000120013 739 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm13508-201ENSMUST00000121639 775 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm22646-201ENSMUST00000175130 115 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm11394-201ENSMUST00000181421 517 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Mir3620-201ENSMUST00000184710 61 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Mir6933-201ENSMUST00000184982 81 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm19503-201ENSMUST00000187109 241 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm17967-201ENSMUST00000195319 647 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm44650-201ENSMUST00000206929 194 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.01□□□□□ -1.61
Vps54Q5SPW0 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.01□□□□□ -1.61
Vps54Q5SPW0 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 AC154838.1-201ENSMUST00000228944 911 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm24319-201ENSMUST00000083389 107 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Vps54Q5SPW0 AC152162.1-201ENSMUST00000225910 2917 ntBASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Vps54Q5SPW0 Gm14806-201ENSMUST00000116606 2110 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Vps54Q5SPW0 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Vps54Q5SPW0 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Vps54Q5SPW0 Mir551b-201ENSMUST00000102165 98 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm9308-201ENSMUST00000119073 448 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm15120-201ENSMUST00000120602 301 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm3835-201ENSMUST00000120752 403 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm25104-201ENSMUST00000122476 163 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm4207-201ENSMUST00000173144 960 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm8902-201ENSMUST00000174341 1096 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm25525-201ENSMUST00000177701 107 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm26178-201ENSMUST00000177706 107 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm26465-201ENSMUST00000178517 107 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm24317-201ENSMUST00000178536 107 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm25021-201ENSMUST00000179184 107 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm22995-201ENSMUST00000179670 107 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm24424-201ENSMUST00000179714 107 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm24389-201ENSMUST00000179962 107 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm25672-201ENSMUST00000180111 107 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm21070-201ENSMUST00000182425 985 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm27715-201ENSMUST00000184714 260 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm29013-201ENSMUST00000187431 237 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm29163-201ENSMUST00000188029 107 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm18547-201ENSMUST00000192439 811 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC5□□□□□ -1.61
Vps54Q5SPW0 AC161456.1-201ENSMUST00000206771 887 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm45727-201ENSMUST00000212886 572 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Vps54Q5SPW0 AC122448.1-201ENSMUST00000226317 772 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC5□□□□□ -1.61
Vps54Q5SPW0 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm23815-201ENSMUST00000083231 107 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm23520-201ENSMUST00000093736 107 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Gm18180-201ENSMUST00000187562 1484 ntBASIC5□□□□□ -1.61
Vps54Q5SPW0 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Vps54Q5SPW0 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Vps54Q5SPW0 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Vps54Q5SPW0 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.99□□□□□ -1.61
Vps54Q5SPW0 AC149294.7-201ENSMUST00000227475 1432 ntBASIC4.99□□□□□ -1.61
Vps54Q5SPW0 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Vps54Q5SPW0 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Vps54Q5SPW0 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Vps54Q5SPW0 Gm16383-201ENSMUST00000118122 232 ntBASIC4.99□□□□□ -1.61
Vps54Q5SPW0 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.99□□□□□ -1.61
Vps54Q5SPW0 Gm13902-201ENSMUST00000120168 605 ntBASIC4.99□□□□□ -1.61
Vps54Q5SPW0 Gm13080-201ENSMUST00000120556 420 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms