Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Trim41Q5NCC3 Cmah-208ENSMUST00000224819 9482 ntBASIC10.28□□□□□ -0.76
Trim41Q5NCC3 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trim41Q5NCC3 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim41Q5NCC3 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim41Q5NCC3 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trim41Q5NCC3 Gm38264-201ENSMUST00000194850 2032 ntBASIC10.28□□□□□ -0.76
Trim41Q5NCC3 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trim41Q5NCC3 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Trim41Q5NCC3 CT009757.5-201ENSMUST00000221858 3425 ntBASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Gm23171-201ENSMUST00000157159 264 ntBASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Gm18116-201ENSMUST00000220920 537 ntBASIC10.27□□□□□ -0.77
Trim41Q5NCC3 AC166358.7-201ENSMUST00000221132 108 ntBASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 AC125543.5-201ENSMUST00000222799 108 ntBASIC10.27□□□□□ -0.77
Trim41Q5NCC3 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Mir346-201ENSMUST00000083547 98 ntBASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Gm6125-201ENSMUST00000217983 3472 ntBASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Gm43793-201ENSMUST00000201645 1333 ntBASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim41Q5NCC3 Gm44847-201ENSMUST00000207104 1991 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm14647-201ENSMUST00000119392 680 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm22791-201ENSMUST00000157232 145 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm22765-201ENSMUST00000158371 128 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Ear-ps5-201ENSMUST00000164700 463 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm17062-201ENSMUST00000166987 461 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm29228-201ENSMUST00000185489 418 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm36984-201ENSMUST00000192770 235 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm42643-201ENSMUST00000200504 279 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 CR974592.1-201ENSMUST00000220422 574 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm46389-201ENSMUST00000223199 392 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 AL589742.1-201ENSMUST00000226034 349 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm26447-201ENSMUST00000082448 129 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 n-R5s215-201ENSMUST00000082480 104 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm37668-201ENSMUST00000193745 1944 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 AC124446.1-201ENSMUST00000221027 2644 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 AC167013.5-201ENSMUST00000227597 2947 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm43317-201ENSMUST00000197924 2544 ntBASIC10.26□□□□□ -0.77
Trim41Q5NCC3 Gm44697-201ENSMUST00000207756 1679 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Gm37221-201ENSMUST00000194472 3007 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Gm25213-201ENSMUST00000102388 113 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Gm11898-201ENSMUST00000117161 385 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Gm22482-201ENSMUST00000122563 359 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Ear-ps8-201ENSMUST00000161935 354 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Gm23793-201ENSMUST00000179396 117 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Gm4714-201ENSMUST00000203395 279 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Gm34224-201ENSMUST00000204606 364 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Gm10709-201ENSMUST00000213318 480 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Gm18904-201ENSMUST00000218756 329 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Gm20102-201ENSMUST00000222445 220 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 AC154467.1-201ENSMUST00000227527 449 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Gm5653-201ENSMUST00000223393 1337 ntBASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trim41Q5NCC3 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 123.4 ms