Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm46998-201ENSMUST00000221444 330 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 AC132433.1-201ENSMUST00000221553 1101 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Snord14e-201ENSMUST00000082857 90 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Upf3bQ3ULL6 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm24318-201ENSMUST00000104490 131 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm22493-201ENSMUST00000104494 132 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm4596-201ENSMUST00000117197 442 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm12252-201ENSMUST00000119517 219 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm9003-201ENSMUST00000121810 482 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm25806-201ENSMUST00000122782 122 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm22398-201ENSMUST00000174941 125 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm25731-201ENSMUST00000175167 125 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Mir5121-201ENSMUST00000198528 74 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm7468-201ENSMUST00000203900 652 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm43922-201ENSMUST00000205071 328 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm6303-201ENSMUST00000210123 471 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm45317-201ENSMUST00000210385 223 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm45727-201ENSMUST00000212886 572 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Gm29774-201ENSMUST00000219270 436 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Upf3bQ3ULL6 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm13664-201ENSMUST00000117304 345 ntBASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm25106-201ENSMUST00000122672 134 ntBASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm22613-201ENSMUST00000122679 292 ntBASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm23897-201ENSMUST00000158110 158 ntBASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm37837-201ENSMUST00000191743 604 ntBASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm18547-201ENSMUST00000192439 811 ntBASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm45710-201ENSMUST00000212847 215 ntBASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Upf3bQ3ULL6 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Gm17060-201ENSMUST00000172394 824 ntBASIC4.28□□□□□ -1.72
Upf3bQ3ULL6 Gm29563-201ENSMUST00000187249 496 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms