Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC6.39□□□□□ -1.39
Shroom4Q1W617 Gm11281-201ENSMUST00000141391 576 ntBASIC6.39□□□□□ -1.39
Shroom4Q1W617 Gm19637-201ENSMUST00000185933 579 ntBASIC6.39□□□□□ -1.39
Shroom4Q1W617 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Shroom4Q1W617 Gm28655-201ENSMUST00000191538 692 ntBASIC6.39□□□□□ -1.39
Shroom4Q1W617 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Shroom4Q1W617 Gm18597-201ENSMUST00000209519 694 ntBASIC6.39□□□□□ -1.39
Shroom4Q1W617 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.39□□□□□ -1.39
Shroom4Q1W617 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Shroom4Q1W617 AC134596.1-201ENSMUST00000222016 1922 ntBASIC6.38□□□□□ -1.39
Shroom4Q1W617 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Shroom4Q1W617 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Gm25507-201ENSMUST00000116981 144 ntBASIC6.38□□□□□ -1.39
Shroom4Q1W617 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC6.38□□□□□ -1.39
Shroom4Q1W617 Gm6461-201ENSMUST00000120015 633 ntBASIC6.38□□□□□ -1.39
Shroom4Q1W617 Mup-ps20-201ENSMUST00000121132 389 ntBASIC6.38□□□□□ -1.39
Shroom4Q1W617 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Gm28997-201ENSMUST00000188759 429 ntBASIC6.38□□□□□ -1.39
Shroom4Q1W617 Gm43491-201ENSMUST00000197133 784 ntBASIC6.38□□□□□ -1.39
Shroom4Q1W617 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC6.38□□□□□ -1.39
Shroom4Q1W617 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Shroom4Q1W617 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Shroom4Q1W617 Gm21037-201ENSMUST00000209086 2608 ntBASIC6.37□□□□□ -1.39
Shroom4Q1W617 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC6.37□□□□□ -1.39
Shroom4Q1W617 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Shroom4Q1W617 Gm45093-201ENSMUST00000206859 2463 ntBASIC6.37□□□□□ -1.39
Shroom4Q1W617 Gm44897-201ENSMUST00000206187 1341 ntBASIC6.37□□□□□ -1.39
Shroom4Q1W617 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Shroom4Q1W617 Gm11325-201ENSMUST00000119967 469 ntBASIC6.37□□□□□ -1.39
Shroom4Q1W617 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC6.37□□□□□ -1.39
Shroom4Q1W617 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC6.37□□□□□ -1.39
Shroom4Q1W617 Gm27861-201ENSMUST00000183920 214 ntBASIC6.37□□□□□ -1.39
Shroom4Q1W617 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC6.37□□□□□ -1.39
Shroom4Q1W617 Gm44332-201ENSMUST00000203712 433 ntBASIC6.37□□□□□ -1.39
Shroom4Q1W617 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC6.37□□□□□ -1.39
Shroom4Q1W617 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC6.37□□□□□ -1.39
Shroom4Q1W617 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Shroom4Q1W617 AC158392.1-201ENSMUST00000223720 1069 ntBASIC6.37□□□□□ -1.39
Shroom4Q1W617 Gm23925-201ENSMUST00000082471 132 ntBASIC6.37□□□□□ -1.39
Shroom4Q1W617 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Shroom4Q1W617 Gm38207-201ENSMUST00000193009 3505 ntBASIC6.37□□□□□ -1.39
Shroom4Q1W617 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Shroom4Q1W617 Gm45884-201ENSMUST00000209540 3416 ntBASIC6.37□□□□□ -1.39
Shroom4Q1W617 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC6.37□□□□□ -1.39
Shroom4Q1W617 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm22115-201ENSMUST00000103976 133 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm23923-201ENSMUST00000104108 133 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm22032-201ENSMUST00000116946 116 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm23667-201ENSMUST00000157466 120 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm25667-201ENSMUST00000157701 275 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm26320-201ENSMUST00000157742 306 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm25436-201ENSMUST00000158275 145 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm17075-201ENSMUST00000171924 670 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Mir7578-201ENSMUST00000183455 82 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm37005-201ENSMUST00000193281 1164 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC6.36□□□□□ -1.39
Shroom4Q1W617 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 AC161426.1-201ENSMUST00000214137 286 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Shroom4Q1W617 AC153936.1-201ENSMUST00000219874 395 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm12582-201ENSMUST00000030555 697 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm44678-201ENSMUST00000207828 2775 ntBASIC6.36□□□□□ -1.39
Shroom4Q1W617 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Shroom4Q1W617 Gm44562-201ENSMUST00000207194 1347 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms