Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col6a1Q04857 Mir669g-201ENSMUST00000116809 123 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm7421-201ENSMUST00000119298 639 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm7365-201ENSMUST00000120877 639 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm25163-201ENSMUST00000158905 104 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm22857-201ENSMUST00000174969 134 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm5527-201ENSMUST00000179821 642 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Mir6400-201ENSMUST00000184870 92 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm28418-201ENSMUST00000186179 423 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.09□□□□□ -1.43
Col6a1Q04857 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a1Q04857 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm43524-201ENSMUST00000197278 298 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm3690-201ENSMUST00000211341 262 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 AC161114.1-201ENSMUST00000218223 474 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a1Q04857 AC154552.4-201ENSMUST00000222171 151 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 AC113031.5-201ENSMUST00000227116 606 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col6a1Q04857 n-R5s94-201ENSMUST00000082573 119 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 n-R5s85-201ENSMUST00000083453 113 ntBASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col6a1Q04857 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Col6a1Q04857 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a1Q04857 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col6a1Q04857 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a1Q04857 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a1Q04857 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Col6a1Q04857 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Col6a1Q04857 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Col6a1Q04857 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a1Q04857 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a1Q04857 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a1Q04857 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a1Q04857 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a1Q04857 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a1Q04857 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a1Q04857 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm14050-201ENSMUST00000117052 346 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm14711-201ENSMUST00000117056 217 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm14995-201ENSMUST00000117135 391 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm15670-201ENSMUST00000117740 447 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm14172-201ENSMUST00000118255 644 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm15988-201ENSMUST00000118677 367 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm14867-201ENSMUST00000120156 866 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm15840-201ENSMUST00000122099 943 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm25430-201ENSMUST00000157614 289 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm22534-201ENSMUST00000158173 104 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm25605-201ENSMUST00000158364 124 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm22158-201ENSMUST00000158411 126 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC6.08□□□□□ -1.44
Col6a1Q04857 Fth-ps2-201ENSMUST00000168364 516 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm23619-201ENSMUST00000178411 94 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm25474-201ENSMUST00000179052 94 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm22047-201ENSMUST00000179176 94 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm23003-201ENSMUST00000179948 107 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm29592-201ENSMUST00000189434 370 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm21735-201ENSMUST00000190360 696 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a1Q04857 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 AC152979.3-201ENSMUST00000217720 479 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC6.08□□□□□ -1.44
Col6a1Q04857 AC132112.1-201ENSMUST00000226354 505 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 AC125539.2-201ENSMUST00000228339 753 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm24706-201ENSMUST00000082806 137 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col6a1Q04857 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Col6a1Q04857 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Col6a1Q04857 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a1Q04857 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.08□□□□□ -1.44
Col6a1Q04857 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a1Q04857 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a1Q04857 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a1Q04857 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.08□□□□□ -1.44
Col6a1Q04857 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm38278-201ENSMUST00000194715 1365 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Col6a1Q04857 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a1Q04857 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.07□□□□□ -1.44
Col6a1Q04857 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.07□□□□□ -1.44
Col6a1Q04857 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.07□□□□□ -1.44
Col6a1Q04857 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 110.2 ms