Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm25748-201ENSMUST00000175487 70 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm25817-201ENSMUST00000177758 121 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm24766-201ENSMUST00000179182 121 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Mir7658-201ENSMUST00000184043 57 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Mir7047-201ENSMUST00000184595 64 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm29408-201ENSMUST00000187536 216 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm28997-201ENSMUST00000188759 429 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm37791-201ENSMUST00000195081 286 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm43649-201ENSMUST00000196596 391 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm43424-201ENSMUST00000200484 253 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm8132-201ENSMUST00000204938 640 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm18377-201ENSMUST00000215141 607 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm7034-201ENSMUST00000218638 645 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm17829-201ENSMUST00000219782 344 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx3-1P97436 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 AC124446.1-201ENSMUST00000221027 2644 ntBASIC3.53□□□□□ -1.84
Nkx3-1P97436 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
Nkx3-1P97436 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.53□□□□□ -1.85
Nkx3-1P97436 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm24581-201ENSMUST00000103962 133 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm25833-201ENSMUST00000104137 133 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm26418-201ENSMUST00000104275 137 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm26019-201ENSMUST00000104407 119 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm6754-201ENSMUST00000117124 913 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm13690-201ENSMUST00000118989 285 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm14714-201ENSMUST00000119743 439 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm25456-201ENSMUST00000157952 109 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm22857-201ENSMUST00000174969 134 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm19427-201ENSMUST00000183619 208 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm28190-201ENSMUST00000189766 722 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm28500-201ENSMUST00000190286 151 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm43586-201ENSMUST00000195948 310 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 AC159256.1-201ENSMUST00000224298 1039 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm7381-201ENSMUST00000098958 300 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm38010-201ENSMUST00000192592 2784 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Nkx3-1P97436 Gm44860-201ENSMUST00000208473 2346 ntBASIC3.52□□□□□ -1.85
Nkx3-1P97436 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Nkx3-1P97436 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm4736-201ENSMUST00000100870 380 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm14605-201ENSMUST00000120599 268 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm15799-201ENSMUST00000120899 289 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 Gm15885-201ENSMUST00000122114 388 ntBASIC3.51□□□□□ -1.85
Nkx3-1P97436 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms