Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 n-R5s68-201ENSMUST00000122639 82 ntBASIC2.65□□□□□ -1.98
PrkdcP97313 Gm23773-201ENSMUST00000158985 296 ntBASIC2.65□□□□□ -1.98
PrkdcP97313 Gm36259-201ENSMUST00000197340 392 ntBASIC2.65□□□□□ -1.98
PrkdcP97313 Gm32222-201ENSMUST00000203296 298 ntBASIC2.65□□□□□ -1.98
PrkdcP97313 Gm18597-201ENSMUST00000209519 694 ntBASIC2.65□□□□□ -1.98
PrkdcP97313 Gm45513-201ENSMUST00000210228 376 ntBASIC2.65□□□□□ -1.98
PrkdcP97313 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC2.65□□□□□ -1.98
PrkdcP97313 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
PrkdcP97313 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
PrkdcP97313 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
PrkdcP97313 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC2.65□□□□□ -1.98
PrkdcP97313 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
PrkdcP97313 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
PrkdcP97313 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
PrkdcP97313 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
PrkdcP97313 Gm22674-201ENSMUST00000104413 131 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm13761-201ENSMUST00000117238 807 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm8475-201ENSMUST00000118211 526 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm13785-201ENSMUST00000119099 690 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC2.65□□□□□ -1.99
PrkdcP97313 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC2.65□□□□□ -1.99
PrkdcP97313 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm28781-201ENSMUST00000185760 696 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm28339-201ENSMUST00000185845 696 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm29574-201ENSMUST00000186226 696 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm28828-201ENSMUST00000186601 696 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm29307-201ENSMUST00000187367 696 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm28896-201ENSMUST00000188609 696 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm29339-201ENSMUST00000189613 696 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm28159-201ENSMUST00000190296 696 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm29407-201ENSMUST00000191468 696 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm37700-201ENSMUST00000192617 965 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.65□□□□□ -1.99
PrkdcP97313 Gm38107-201ENSMUST00000194873 696 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC2.65□□□□□ -1.99
PrkdcP97313 Gm43521-201ENSMUST00000197838 255 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm43107-201ENSMUST00000198729 255 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
PrkdcP97313 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
PrkdcP97313 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
PrkdcP97313 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Gm45809-201ENSMUST00000211661 3894 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Gm27532-201ENSMUST00000183726 113 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Gm43825-201ENSMUST00000199650 734 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC2.65□□□□□ -1.99
PrkdcP97313 Gm7624-201ENSMUST00000209702 435 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC2.65□□□□□ -1.99
PrkdcP97313 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
PrkdcP97313 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC2.65□□□□□ -1.99
PrkdcP97313 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
PrkdcP97313 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
PrkdcP97313 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PrkdcP97313 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
PrkdcP97313 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PrkdcP97313 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PrkdcP97313 Hm629797-201ENSMUST00000183645 2398 ntBASIC2.64□□□□□ -1.99
PrkdcP97313 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC2.64□□□□□ -1.99
PrkdcP97313 Gm16005-201ENSMUST00000120515 269 ntBASIC2.64□□□□□ -1.99
PrkdcP97313 Gm12978-201ENSMUST00000121250 522 ntBASIC2.64□□□□□ -1.99
PrkdcP97313 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC2.64□□□□□ -1.99
PrkdcP97313 Gm28113-201ENSMUST00000188280 229 ntBASIC2.64□□□□□ -1.99
PrkdcP97313 Gm4644-201ENSMUST00000197587 400 ntBASIC2.64□□□□□ -1.99
PrkdcP97313 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PrkdcP97313 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC2.64□□□□□ -1.99
PrkdcP97313 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
PrkdcP97313 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC2.64□□□□□ -1.99
PrkdcP97313 Gm45854-201ENSMUST00000211857 3488 ntBASIC2.64□□□□□ -1.99
PrkdcP97313 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PrkdcP97313 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC2.64□□□□□ -1.99
PrkdcP97313 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
PrkdcP97313 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PrkdcP97313 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
PrkdcP97313 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC2.64□□□□□ -1.99
PrkdcP97313 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PrkdcP97313 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
PrkdcP97313 Gm6680-201ENSMUST00000192789 950 ntBASIC2.64□□□□□ -1.99
PrkdcP97313 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC2.64□□□□□ -1.99
PrkdcP97313 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.64□□□□□ -1.99
PrkdcP97313 CT010511.1-201ENSMUST00000224570 315 ntBASIC2.64□□□□□ -1.99
PrkdcP97313 AC117656.3-202ENSMUST00000225842 1055 ntBASIC2.64□□□□□ -1.99
PrkdcP97313 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
PrkdcP97313 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms