Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Rfx1P48377 Snord38a-201ENSMUST00000083746 71 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Gm6503-201ENSMUST00000210829 2225 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rfx1P48377 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rfx1P48377 Gm45066-201ENSMUST00000207528 2551 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rfx1P48377 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC6.5□□□□□ -1.37
Rfx1P48377 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Rfx1P48377 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Rfx1P48377 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Rfx1P48377 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Rfx1P48377 Gm43389-201ENSMUST00000196080 2595 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Rfx1P48377 Gm13503-201ENSMUST00000119017 446 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 Gm14577-201ENSMUST00000121134 256 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.5□□□□□ -1.37
Rfx1P48377 Gm12833-201ENSMUST00000136112 477 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Rfx1P48377 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Rfx1P48377 Gm4487-201ENSMUST00000150617 442 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 Gm24733-201ENSMUST00000158863 253 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 Gm26177-201ENSMUST00000178683 107 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 Mir6412-201ENSMUST00000184477 97 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 Gm36984-201ENSMUST00000192770 235 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Rfx1P48377 Gm44319-201ENSMUST00000196974 93 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 Gm43035-201ENSMUST00000197626 517 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 Gm44312-201ENSMUST00000203536 469 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 AC138284.2-201ENSMUST00000213982 567 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC6.5□□□□□ -1.37
Rfx1P48377 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 AC192333.1-201ENSMUST00000224573 376 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Rfx1P48377 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Rfx1P48377 Gm23423-201ENSMUST00000082782 106 ntBASIC6.5□□□□□ -1.37
Rfx1P48377 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Rfx1P48377 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Rfx1P48377 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Rfx1P48377 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Rfx1P48377 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Rfx1P48377 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Rfx1P48377 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Rfx1P48377 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Rfx1P48377 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Rfx1P48377 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Rfx1P48377 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx1P48377 Gm18189-201ENSMUST00000218153 1951 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx1P48377 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx1P48377 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rfx1P48377 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rfx1P48377 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rfx1P48377 AC116797.2-201ENSMUST00000224763 4221 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Gm4541-201ENSMUST00000208901 1848 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx1P48377 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx1P48377 Gm23440-201ENSMUST00000104299 130 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.49□□□□□ -1.37
Rfx1P48377 Gm14655-201ENSMUST00000120124 578 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Gm25784-201ENSMUST00000122524 81 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC6.49□□□□□ -1.37
Rfx1P48377 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.49□□□□□ -1.37
Rfx1P48377 Gm9006-201ENSMUST00000165520 841 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC6.49□□□□□ -1.37
Rfx1P48377 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Gm24303-201ENSMUST00000178237 126 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC6.49□□□□□ -1.37
Rfx1P48377 Gm37430-201ENSMUST00000193039 196 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Gm5001-201ENSMUST00000204361 331 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
Rfx1P48377 Gm8423-201ENSMUST00000211387 607 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC6.49□□□□□ -1.37
Rfx1P48377 AC144628.2-201ENSMUST00000227374 352 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Gm22684-201ENSMUST00000082849 132 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rfx1P48377 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rfx1P48377 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rfx1P48377 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
Rfx1P48377 Gm43462-201ENSMUST00000200265 3648 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Gm37903-201ENSMUST00000192122 2381 ntBASIC6.49□□□□□ -1.37
Rfx1P48377 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx1P48377 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rfx1P48377 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Rfx1P48377 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC6.48□□□□□ -1.37
Rfx1P48377 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms