Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col18a1P39061 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col18a1P39061 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Col18a1P39061 Gm43011-201ENSMUST00000197897 4433 ntBASIC6.3□□□□□ -1.4
Col18a1P39061 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Col18a1P39061 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col18a1P39061 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col18a1P39061 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col18a1P39061 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col18a1P39061 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Col18a1P39061 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col18a1P39061 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col18a1P39061 Gm24608-201ENSMUST00000104381 136 ntBASIC6.3□□□□□ -1.4
Col18a1P39061 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col18a1P39061 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col18a1P39061 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC6.3□□□□□ -1.4
Col18a1P39061 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC6.3□□□□□ -1.4
Col18a1P39061 Gm27659-201ENSMUST00000183472 98 ntBASIC6.3□□□□□ -1.4
Col18a1P39061 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC6.3□□□□□ -1.4
Col18a1P39061 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC6.3□□□□□ -1.4
Col18a1P39061 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col18a1P39061 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col18a1P39061 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.3□□□□□ -1.4
Col18a1P39061 Gm42701-201ENSMUST00000196117 1657 ntBASIC6.3□□□□□ -1.4
Col18a1P39061 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col18a1P39061 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col18a1P39061 Gm43654-201ENSMUST00000200664 3417 ntBASIC6.3□□□□□ -1.4
Col18a1P39061 AC154681.1-201ENSMUST00000225876 1735 ntBASIC6.3□□□□□ -1.4
Col18a1P39061 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Col18a1P39061 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.3□□□□□ -1.4
Col18a1P39061 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col18a1P39061 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Col18a1P39061 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col18a1P39061 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Col18a1P39061 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col18a1P39061 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Col18a1P39061 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col18a1P39061 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col18a1P39061 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col18a1P39061 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC6.29□□□□□ -1.4
Col18a1P39061 Gm6058-201ENSMUST00000154261 399 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC6.29□□□□□ -1.4
Col18a1P39061 Gm4076-201ENSMUST00000179230 965 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Col18a1P39061 Gm28474-201ENSMUST00000188501 315 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm28788-201ENSMUST00000189717 375 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm29558-201ENSMUST00000190134 375 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm37313-201ENSMUST00000191673 290 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm8069-201ENSMUST00000197887 154 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC6.29□□□□□ -1.4
Col18a1P39061 Gm45171-201ENSMUST00000206360 736 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm2829-201ENSMUST00000213121 499 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 AC159619.2-201ENSMUST00000222924 401 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 AC154184.2-201ENSMUST00000225335 349 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col18a1P39061 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col18a1P39061 Gm15975-201ENSMUST00000122385 1402 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm42614-201ENSMUST00000198724 1554 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col18a1P39061 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.29□□□□□ -1.4
Col18a1P39061 Gm42986-201ENSMUST00000201618 3385 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col18a1P39061 Robo2-210ENSMUST00000226478 8059 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col18a1P39061 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col18a1P39061 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col18a1P39061 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Col18a1P39061 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
Col18a1P39061 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC6.29□□□□□ -1.4
Col18a1P39061 Gm25313-201ENSMUST00000101817 116 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm14732-201ENSMUST00000121372 545 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm12893-201ENSMUST00000121732 275 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm25264-201ENSMUST00000158519 117 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm17060-201ENSMUST00000172394 824 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm23287-201ENSMUST00000179427 116 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm23143-201ENSMUST00000180137 116 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.29□□□□□ -1.4
Col18a1P39061 Scgb2b6-201ENSMUST00000188132 330 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm37193-201ENSMUST00000193087 513 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC6.29□□□□□ -1.4
Col18a1P39061 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 AC155929.1-201ENSMUST00000220217 1276 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC6.29□□□□□ -1.4
Col18a1P39061 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col18a1P39061 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col18a1P39061 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col18a1P39061 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col18a1P39061 Rny3-201ENSMUST00000083011 102 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm24871-201ENSMUST00000083099 116 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Gm25099-201ENSMUST00000093716 116 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Rnu5g-201ENSMUST00000093721 116 ntBASIC6.29□□□□□ -1.4
Col18a1P39061 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col18a1P39061 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col18a1P39061 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col18a1P39061 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms