Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col2a1P28481 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col2a1P28481 Gm15926-201ENSMUST00000120492 550 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Gm11200-201ENSMUST00000121698 448 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Gm25105-201ENSMUST00000122477 130 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Gm18558-201ENSMUST00000186253 1214 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Col2a1P28481 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.43□□□□□ -1.7
Col2a1P28481 Gm18403-201ENSMUST00000192907 529 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Gm44294-201ENSMUST00000205090 728 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Gm8748-201ENSMUST00000211125 587 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Gm3086-202ENSMUST00000221248 310 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.43□□□□□ -1.7
Col2a1P28481 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Col2a1P28481 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col2a1P28481 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col2a1P28481 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.42□□□□□ -1.7
Col2a1P28481 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.42□□□□□ -1.7
Col2a1P28481 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Col2a1P28481 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.42□□□□□ -1.7
Col2a1P28481 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col2a1P28481 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Col2a1P28481 Gm25764-201ENSMUST00000104092 134 ntBASIC4.42□□□□□ -1.7
Col2a1P28481 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col2a1P28481 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.42□□□□□ -1.7
Col2a1P28481 Gm12577-201ENSMUST00000119701 574 ntBASIC4.42□□□□□ -1.7
Col2a1P28481 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.42□□□□□ -1.7
Col2a1P28481 Gm24244-201ENSMUST00000157317 130 ntBASIC4.42□□□□□ -1.7
Col2a1P28481 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col2a1P28481 Mir6993-201ENSMUST00000184912 65 ntBASIC4.42□□□□□ -1.7
Col2a1P28481 Gm8641-201ENSMUST00000186995 826 ntBASIC4.42□□□□□ -1.7
Col2a1P28481 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.42□□□□□ -1.7
Col2a1P28481 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.42□□□□□ -1.7
Col2a1P28481 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col2a1P28481 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.42□□□□□ -1.7
Col2a1P28481 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.42□□□□□ -1.7
Col2a1P28481 AC130673.2-201ENSMUST00000228091 797 ntBASIC4.42□□□□□ -1.7
Col2a1P28481 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col2a1P28481 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col2a1P28481 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.42□□□□□ -1.7
Col2a1P28481 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col2a1P28481 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col2a1P28481 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col2a1P28481 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col2a1P28481 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Col2a1P28481 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
Col2a1P28481 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col2a1P28481 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col2a1P28481 Gm22472-201ENSMUST00000104115 134 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Gm25376-201ENSMUST00000104340 133 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Gm14861-201ENSMUST00000119451 455 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Gm13118-201ENSMUST00000120402 549 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Gm23958-201ENSMUST00000157207 105 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col2a1P28481 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Col2a1P28481 Gm24369-201ENSMUST00000175387 96 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.41□□□□□ -1.7
Col2a1P28481 Gm18342-201ENSMUST00000186987 694 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Gm28186-201ENSMUST00000187447 679 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col2a1P28481 Gm38098-201ENSMUST00000194115 241 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Gm29704-201ENSMUST00000196011 253 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Gm7041-201ENSMUST00000201227 524 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Gm44003-201ENSMUST00000203024 490 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Gm45245-201ENSMUST00000210082 376 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col2a1P28481 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col2a1P28481 Gm12582-201ENSMUST00000030555 697 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col2a1P28481 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Col2a1P28481 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
Col2a1P28481 Gm8724-201ENSMUST00000081668 483 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Vaultrc5-201ENSMUST00000083211 143 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.41□□□□□ -1.7
Col2a1P28481 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col2a1P28481 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
Col2a1P28481 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col2a1P28481 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col2a1P28481 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col2a1P28481 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.4□□□□□ -1.7
Col2a1P28481 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
Col2a1P28481 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Col2a1P28481 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col2a1P28481 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Col2a1P28481 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.4□□□□□ -1.7
Col2a1P28481 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Col2a1P28481 Gm15018-201ENSMUST00000117090 633 ntBASIC4.4□□□□□ -1.71
Col2a1P28481 Gm11448-201ENSMUST00000120427 450 ntBASIC4.4□□□□□ -1.71
Col2a1P28481 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.4□□□□□ -1.71
Col2a1P28481 Gm24402-201ENSMUST00000157873 91 ntBASIC4.4□□□□□ -1.71
Col2a1P28481 Gm20693-201ENSMUST00000177431 211 ntBASIC4.4□□□□□ -1.71
Col2a1P28481 Gm28010-201ENSMUST00000179485 126 ntBASIC4.4□□□□□ -1.71
Col2a1P28481 Gm26607-201ENSMUST00000180661 867 ntBASIC4.4□□□□□ -1.71
Col2a1P28481 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.4□□□□□ -1.71
Col2a1P28481 Gm8774-201ENSMUST00000203621 692 ntBASIC4.4□□□□□ -1.71
Col2a1P28481 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms