Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.44□□□□□ -1.86
Sdc1P18828 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm27155-201ENSMUST00000183716 898 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm27733-201ENSMUST00000184803 68 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm7266-201ENSMUST00000187999 405 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm28429-201ENSMUST00000188521 363 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm21006-201ENSMUST00000196930 667 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm44371-201ENSMUST00000204148 467 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Gm44002-201ENSMUST00000205134 594 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm3338-201ENSMUST00000220982 269 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.44□□□□□ -1.86
Sdc1P18828 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Sdc1P18828 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Sdc1P18828 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Sdc1P18828 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Sdc1P18828 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Sdc1P18828 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Sdc1P18828 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Sdc1P18828 AC131068.3-201ENSMUST00000228438 1456 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Sdc1P18828 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Sdc1P18828 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Sdc1P18828 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
Sdc1P18828 Gm11984-201ENSMUST00000118142 766 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Gm11625-201ENSMUST00000119535 296 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Gm14303-201ENSMUST00000121320 171 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Sdc1P18828 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC3.43□□□□□ -1.86
Sdc1P18828 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC3.43□□□□□ -1.86
Sdc1P18828 Gm24507-201ENSMUST00000157683 134 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Gm26045-201ENSMUST00000157862 97 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Gm22156-201ENSMUST00000158409 141 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Mir3572-201ENSMUST00000175549 86 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Gm26915-201ENSMUST00000183080 748 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Mir7211-201ENSMUST00000184071 63 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Mir6715-201ENSMUST00000184990 57 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
Sdc1P18828 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Sdc1P18828 Gm8241-201ENSMUST00000189286 816 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
Sdc1P18828 Gm37050-201ENSMUST00000193464 466 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC3.43□□□□□ -1.86
Sdc1P18828 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.43□□□□□ -1.86
Sdc1P18828 Gm34149-201ENSMUST00000203547 304 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Gm44138-201ENSMUST00000204939 271 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Gm19726-201ENSMUST00000205008 240 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC3.43□□□□□ -1.86
Sdc1P18828 Gm17989-201ENSMUST00000211543 412 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Sdc1P18828 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.43□□□□□ -1.86
Sdc1P18828 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC3.43□□□□□ -1.86
Sdc1P18828 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Sdc1P18828 Gm7204-201ENSMUST00000062591 600 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Sdc1P18828 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Sdc1P18828 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Sdc1P18828 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Sdc1P18828 Gm37764-201ENSMUST00000194664 2150 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Sdc1P18828 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Sdc1P18828 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Gm42681-201ENSMUST00000197999 1611 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Sdc1P18828 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.43□□□□□ -1.86
Sdc1P18828 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.43□□□□□ -1.86
Sdc1P18828 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Sdc1P18828 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC3.42□□□□□ -1.86
Sdc1P18828 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Sdc1P18828 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 AC159308.1-201ENSMUST00000216615 1351 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Sdc1P18828 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Sdc1P18828 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.42□□□□□ -1.86
Sdc1P18828 Gm11914-201ENSMUST00000117094 507 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm12285-201ENSMUST00000117347 233 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm3835-201ENSMUST00000120752 403 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 Gm9428-201ENSMUST00000127214 769 ntBASIC3.42□□□□□ -1.86
Sdc1P18828 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Sdc1P18828 Mir1963-201ENSMUST00000158594 59 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms