Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm5358-201ENSMUST00000212814 353 ntBASIC3.64□□□□□ -1.83
Cdx1P18111 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdx1P18111 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.64□□□□□ -1.83
Cdx1P18111 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.64□□□□□ -1.83
Cdx1P18111 Gm7822-201ENSMUST00000222433 581 ntBASIC3.64□□□□□ -1.83
Cdx1P18111 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.64□□□□□ -1.83
Cdx1P18111 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx1P18111 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC3.64□□□□□ -1.83
Cdx1P18111 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdx1P18111 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdx1P18111 Gm22868-201ENSMUST00000083955 164 ntBASIC3.64□□□□□ -1.83
Cdx1P18111 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.64□□□□□ -1.83
Cdx1P18111 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx1P18111 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Cdx1P18111 AC120375.2-201ENSMUST00000226532 1853 ntBASIC3.64□□□□□ -1.83
Cdx1P18111 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx1P18111 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdx1P18111 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Cdx1P18111 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdx1P18111 Gm38106-201ENSMUST00000194107 2534 ntBASIC3.64□□□□□ -1.83
Cdx1P18111 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdx1P18111 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Cdx1P18111 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdx1P18111 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cdx1P18111 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC3.63□□□□□ -1.83
Cdx1P18111 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdx1P18111 Gm22488-201ENSMUST00000116811 127 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm11822-201ENSMUST00000119177 415 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm13932-201ENSMUST00000120873 610 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Cdx1P18111 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.63□□□□□ -1.83
Cdx1P18111 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC3.63□□□□□ -1.83
Cdx1P18111 Gm22036-201ENSMUST00000157279 215 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm25839-201ENSMUST00000158921 103 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdx1P18111 Gm24811-201ENSMUST00000175313 100 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm22108-201ENSMUST00000177961 106 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm24798-201ENSMUST00000179334 106 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdx1P18111 Gm21070-201ENSMUST00000182425 985 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Mir6938-201ENSMUST00000184173 63 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm27387-201ENSMUST00000184583 116 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm28830-201ENSMUST00000188192 213 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm29036-201ENSMUST00000189967 877 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm18382-201ENSMUST00000194394 582 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm20056-201ENSMUST00000194813 519 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Cdx1P18111 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.63□□□□□ -1.83
Cdx1P18111 Gm7041-201ENSMUST00000201227 524 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm43580-201ENSMUST00000202892 284 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC3.63□□□□□ -1.83
Cdx1P18111 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Cdx1P18111 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC3.63□□□□□ -1.83
Cdx1P18111 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Gm18871-201ENSMUST00000218655 745 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC3.63□□□□□ -1.83
Cdx1P18111 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdx1P18111 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdx1P18111 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdx1P18111 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Cdx1P18111 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Cdx1P18111 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdx1P18111 Mir202-201ENSMUST00000083568 72 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cdx1P18111 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cdx1P18111 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdx1P18111 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
Cdx1P18111 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Cdx1P18111 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cdx1P18111 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.63□□□□□ -1.83
Cdx1P18111 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx1P18111 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx1P18111 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdx1P18111 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.62□□□□□ -1.83
Cdx1P18111 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm13664-201ENSMUST00000117304 345 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm11633-201ENSMUST00000118176 444 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm11790-201ENSMUST00000119569 455 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm12466-201ENSMUST00000121199 620 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm25278-201ENSMUST00000157267 120 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm26045-201ENSMUST00000157862 97 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm24217-201ENSMUST00000158260 133 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm16303-201ENSMUST00000161498 390 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Gm16545-201ENSMUST00000161968 463 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.62□□□□□ -1.83
Cdx1P18111 Gm23152-201ENSMUST00000175322 116 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.62□□□□□ -1.83
Cdx1P18111 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms