Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col3a1P08121 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col3a1P08121 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col3a1P08121 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col3a1P08121 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col3a1P08121 Gm23271-201ENSMUST00000104052 124 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 Gm12900-201ENSMUST00000120919 573 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 Gm11645-201ENSMUST00000121589 649 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Col3a1P08121 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col3a1P08121 Gm19791-201ENSMUST00000180398 859 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col3a1P08121 Gm17954-201ENSMUST00000195893 607 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.92□□□□□ -1.62
Col3a1P08121 Gm18429-201ENSMUST00000198707 421 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 Gm19596-201ENSMUST00000203685 739 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.92□□□□□ -1.62
Col3a1P08121 Gm39197-201ENSMUST00000212069 457 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col3a1P08121 Gm18242-201ENSMUST00000218455 542 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 AC167202.1-201ENSMUST00000219027 331 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 AC154419.1-201ENSMUST00000227627 272 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Col3a1P08121 Mir34b-201ENSMUST00000083558 84 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Col3a1P08121 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col3a1P08121 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.92□□□□□ -1.62
Col3a1P08121 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col3a1P08121 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col3a1P08121 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col3a1P08121 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
Col3a1P08121 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col3a1P08121 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col3a1P08121 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col3a1P08121 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col3a1P08121 Gm24318-201ENSMUST00000104490 131 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Gm12379-201ENSMUST00000119607 391 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Gm22968-201ENSMUST00000157955 118 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Gm23112-201ENSMUST00000158606 125 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Gm15795-201ENSMUST00000160969 553 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Col3a1P08121 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.91□□□□□ -1.62
Col3a1P08121 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Col3a1P08121 Gm19086-201ENSMUST00000190772 665 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Gm43028-201ENSMUST00000202561 481 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Gm2691-201ENSMUST00000203205 901 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Gm44137-201ENSMUST00000203670 367 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Gm8035-201ENSMUST00000204625 687 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Gm7443-201ENSMUST00000206355 378 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.91□□□□□ -1.62
Col3a1P08121 Gm45553-201ENSMUST00000209929 507 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Gm6929-201ENSMUST00000210930 468 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Gm18487-201ENSMUST00000215826 878 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 AC147101.1-201ENSMUST00000217964 312 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 AC158631.2-201ENSMUST00000219999 478 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC4.91□□□□□ -1.62
Col3a1P08121 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.91□□□□□ -1.62
Col3a1P08121 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col3a1P08121 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col3a1P08121 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col3a1P08121 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Col3a1P08121 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Col3a1P08121 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col3a1P08121 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Col3a1P08121 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Col3a1P08121 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Col3a1P08121 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.9□□□□□ -1.62
Col3a1P08121 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Col3a1P08121 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col3a1P08121 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col3a1P08121 Gm11781-201ENSMUST00000118328 472 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 Gm11718-201ENSMUST00000119942 537 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 Gm11829-201ENSMUST00000121003 282 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 Gm25102-201ENSMUST00000122479 112 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Col3a1P08121 Mir6408-201ENSMUST00000183643 91 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Col3a1P08121 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 Gm20915-201ENSMUST00000191575 663 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.9□□□□□ -1.62
Col3a1P08121 Gm17937-201ENSMUST00000197908 742 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 Gm42453-201ENSMUST00000200477 409 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 Gm43424-201ENSMUST00000200484 253 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 Gm44656-201ENSMUST00000208428 490 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC4.9□□□□□ -1.62
Col3a1P08121 Gm8288-201ENSMUST00000223406 593 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
Col3a1P08121 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Col3a1P08121 Mir370-201ENSMUST00000083499 79 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.9□□□□□ -1.62
Col3a1P08121 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col3a1P08121 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col3a1P08121 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms