Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Dkk1O54908 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Dkk1O54908 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Dkk1O54908 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Dkk1O54908 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Dkk1O54908 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Dkk1O54908 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Dkk1O54908 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Dkk1O54908 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Dkk1O54908 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Gm37053-201ENSMUST00000192399 2087 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.24□□□□□ -1.41
Dkk1O54908 Mir687-201ENSMUST00000102166 89 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Gm24284-201ENSMUST00000104240 142 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Gm13400-201ENSMUST00000117436 380 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Gm7670-201ENSMUST00000121272 641 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Gm22447-201ENSMUST00000158155 92 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Gm22540-201ENSMUST00000158168 117 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC6.24□□□□□ -1.41
Dkk1O54908 Gm23139-201ENSMUST00000179454 132 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Gm35648-201ENSMUST00000202304 475 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.24□□□□□ -1.41
Dkk1O54908 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC6.24□□□□□ -1.41
Dkk1O54908 Gm45319-201ENSMUST00000210220 318 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Gm45492-201ENSMUST00000211611 288 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC6.24□□□□□ -1.41
Dkk1O54908 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 n-R5s156-201ENSMUST00000083377 105 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Dkk1O54908 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Dkk1O54908 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Dkk1O54908 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Dkk1O54908 Gm37534-201ENSMUST00000194483 5222 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Gm43099-201ENSMUST00000198943 5241 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Dkk1O54908 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Dkk1O54908 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Gm43123-201ENSMUST00000201893 3471 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Dkk1O54908 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Dkk1O54908 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Dkk1O54908 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Dkk1O54908 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Dkk1O54908 Gm44996-201ENSMUST00000208787 2980 ntBASIC6.24□□□□□ -1.41
Dkk1O54908 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Dkk1O54908 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Dkk1O54908 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Dkk1O54908 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Dkk1O54908 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Dkk1O54908 Gm45517-201ENSMUST00000209973 2468 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Dkk1O54908 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Dkk1O54908 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC6.23□□□□□ -1.41
Dkk1O54908 Gm42482-201ENSMUST00000198904 1947 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Dkk1O54908 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Dkk1O54908 Gm44021-201ENSMUST00000203055 3516 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Dkk1O54908 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Dkk1O54908 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Dkk1O54908 Gm22004-201ENSMUST00000101884 107 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 Gm23652-201ENSMUST00000116752 107 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 Gm12710-201ENSMUST00000119011 216 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 Gm20534-201ENSMUST00000172957 172 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 Gm25121-201ENSMUST00000179846 79 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 Mir6972-201ENSMUST00000184774 64 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 Gm18540-201ENSMUST00000204025 526 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 CT030247.1-201ENSMUST00000216810 267 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 Gm18628-201ENSMUST00000220584 475 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.23□□□□□ -1.41
Dkk1O54908 AC168881.1-201ENSMUST00000226018 430 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 Gm9818-201ENSMUST00000050900 255 ntBASIC6.23□□□□□ -1.41
Dkk1O54908 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms