Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm9239-201ENSMUST00000186942 2557 ntBASIC4.82□□□□□ -1.64
Ccdc188F6WEU2 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc188F6WEU2 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc188F6WEU2 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc188F6WEU2 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.82□□□□□ -1.64
Ccdc188F6WEU2 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc188F6WEU2 AC151971.5-201ENSMUST00000214422 3254 ntBASIC4.82□□□□□ -1.64
Ccdc188F6WEU2 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc188F6WEU2 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc188F6WEU2 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm26367-201ENSMUST00000104165 132 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm24608-201ENSMUST00000104381 136 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm15403-201ENSMUST00000119343 1227 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm13132-201ENSMUST00000121194 472 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm9001-201ENSMUST00000121642 399 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm13471-201ENSMUST00000122057 433 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm25197-201ENSMUST00000175516 126 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Mir7578-201ENSMUST00000183455 82 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm27522-201ENSMUST00000183949 230 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm29288-201ENSMUST00000191582 901 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm25140-201ENSMUST00000083254 140 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 Gm45183-201ENSMUST00000207937 1497 ntBASIC4.81□□□□□ -1.64
Ccdc188F6WEU2 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm26377-201ENSMUST00000102184 108 ntBASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm14086-201ENSMUST00000117152 173 ntBASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm11911-201ENSMUST00000117938 1023 ntBASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm11829-201ENSMUST00000121003 282 ntBASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm13593-201ENSMUST00000121329 692 ntBASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm14253-201ENSMUST00000122112 639 ntBASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm23098-201ENSMUST00000157552 299 ntBASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm25264-201ENSMUST00000158519 117 ntBASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm25977-201ENSMUST00000158697 85 ntBASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm22011-201ENSMUST00000158790 123 ntBASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Mir6914-201ENSMUST00000184999 69 ntBASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc188F6WEU2 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms