Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm14788-201ENSMUST00000119457 375 ntBASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Gm2710-201ENSMUST00000073196 603 ntBASIC3.82□□□□□ -1.8
Col6a3E9PWQ3 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 AC159326.1-201ENSMUST00000219989 1302 ntBASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 AC154368.2-201ENSMUST00000222334 1724 ntBASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Gm43282-201ENSMUST00000201848 2157 ntBASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Gm13321-201ENSMUST00000117101 400 ntBASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Trbv8-201ENSMUST00000194020 285 ntBASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Snord35b-201ENSMUST00000082833 87 ntBASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Gm43010-201ENSMUST00000195993 2878 ntBASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Gm44587-201ENSMUST00000207399 1685 ntBASIC3.81□□□□□ -1.8
Col6a3E9PWQ3 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Gm43329-201ENSMUST00000200120 3232 ntBASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Gm9157-201ENSMUST00000117673 225 ntBASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 AC165260.6-205ENSMUST00000224190 9762 ntBASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Gm37370-201ENSMUST00000191996 1410 ntBASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Gm14622-201ENSMUST00000117117 468 ntBASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Gm37946-201ENSMUST00000192064 347 ntBASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 AC135377.1-201ENSMUST00000223692 463 ntBASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Gm37244-201ENSMUST00000191748 1981 ntBASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Gm13478-201ENSMUST00000118312 413 ntBASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col6a3E9PWQ3 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Mir3965-201ENSMUST00000175570 69 ntBASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Gm24626-201ENSMUST00000082621 161 ntBASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Gm24119-201ENSMUST00000103979 246 ntBASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Gm22227-201ENSMUST00000157356 259 ntBASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Gm23028-201ENSMUST00000158773 265 ntBASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Gm20162-201ENSMUST00000193629 871 ntBASIC3.79□□□□□ -1.8
Col6a3E9PWQ3 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms