Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Mir7227-201ENSMUST00000200408 59 ntBASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm7721-201ENSMUST00000200446 546 ntBASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.97□□□□□ -1.29
Ube3bQ9ES34 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm18306-201ENSMUST00000207338 569 ntBASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm17988-201ENSMUST00000208796 535 ntBASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm31166-201ENSMUST00000209326 288 ntBASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm8423-201ENSMUST00000211387 607 ntBASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm46997-201ENSMUST00000222108 217 ntBASIC6.97□□□□□ -1.29
Ube3bQ9ES34 AC129017.1-201ENSMUST00000228363 270 ntBASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm26206-201ENSMUST00000082908 110 ntBASIC6.97□□□□□ -1.29
Ube3bQ9ES34 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ube3bQ9ES34 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Ube3bQ9ES34 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Ube3bQ9ES34 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Ube3bQ9ES34 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.96□□□□□ -1.29
Ube3bQ9ES34 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Ube3bQ9ES34 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Mir1903-201ENSMUST00000122574 80 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm26372-201ENSMUST00000157831 236 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm22538-201ENSMUST00000158169 299 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm17109-201ENSMUST00000163985 358 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm27854-201ENSMUST00000175578 244 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm7958-201ENSMUST00000178255 468 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm7950-201ENSMUST00000179633 468 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm27030-201ENSMUST00000182551 464 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Mir7669-201ENSMUST00000183442 58 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Mir6413-201ENSMUST00000184049 108 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm28744-201ENSMUST00000189939 340 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm29736-201ENSMUST00000198189 385 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm5735-201ENSMUST00000207053 167 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm18924-201ENSMUST00000211929 316 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm18587-201ENSMUST00000213736 841 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 AV026068-237ENSMUST00000226075 572 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 AC154467.1-201ENSMUST00000227527 449 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 AC138765.1-201ENSMUST00000228657 385 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm26447-201ENSMUST00000082448 129 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm25853-201ENSMUST00000082793 132 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm23451-201ENSMUST00000083328 122 ntBASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Ube3bQ9ES34 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm38032-201ENSMUST00000195052 1589 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm11881-201ENSMUST00000119408 572 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm6584-201ENSMUST00000119671 447 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm25362-201ENSMUST00000158854 105 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Mir3097-201ENSMUST00000175356 67 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm43142-201ENSMUST00000198670 361 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Mir6906-201ENSMUST00000198998 58 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Crs-ps-201ENSMUST00000203723 760 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm44859-201ENSMUST00000207831 94 ntBASIC6.95□□□□□ -1.3
Ube3bQ9ES34 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms