Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm28263-201ENSMUST00000185884 400 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm43856-201ENSMUST00000197004 369 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm43710-201ENSMUST00000199583 452 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm43441-201ENSMUST00000201458 205 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm43892-201ENSMUST00000204373 265 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm5338-201ENSMUST00000209530 639 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm45689-201ENSMUST00000210522 133 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm3690-201ENSMUST00000211341 262 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm18487-201ENSMUST00000215826 878 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gm22423-201ENSMUST00000082861 184 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Cdc40Q9DC48 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm44224-201ENSMUST00000204131 1463 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm13550-201ENSMUST00000118185 525 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm15553-201ENSMUST00000118757 430 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm11398-201ENSMUST00000120330 320 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm14881-201ENSMUST00000120366 372 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm23781-201ENSMUST00000157940 308 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm22730-201ENSMUST00000158085 171 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm29320-201ENSMUST00000185235 615 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm29179-202ENSMUST00000186138 615 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm29448-201ENSMUST00000186675 615 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm29314-201ENSMUST00000186800 615 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm28253-202ENSMUST00000187971 615 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm29169-201ENSMUST00000189835 615 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm45367-201ENSMUST00000210171 347 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm45523-201ENSMUST00000210712 799 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm46138-201ENSMUST00000215294 426 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 AC117202.1-201ENSMUST00000227007 445 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm26072-201ENSMUST00000083135 107 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm24319-201ENSMUST00000083389 107 ntBASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdc40Q9DC48 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm37195-201ENSMUST00000192006 3018 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm22758-201ENSMUST00000102275 96 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm4910-201ENSMUST00000119605 366 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm14991-201ENSMUST00000119913 598 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm24905-201ENSMUST00000158129 104 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm22646-201ENSMUST00000175130 115 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm19791-201ENSMUST00000180398 859 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms