Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.85□□□□□ -1.63
Smc1aQ9CU62 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Ube2nl-201ENSMUST00000085228 456 ntBASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm12667-201ENSMUST00000118299 1332 ntBASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Gm44224-201ENSMUST00000204131 1463 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Gm15058-201ENSMUST00000117689 458 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Gm13737-201ENSMUST00000119793 232 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Gm15141-201ENSMUST00000121860 729 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Gm23781-201ENSMUST00000157940 308 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Gm5263-201ENSMUST00000163646 601 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Mir6238-201ENSMUST00000184140 129 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Gm37881-201ENSMUST00000193001 421 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Gm43295-201ENSMUST00000201439 412 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Gm19237-201ENSMUST00000205036 1132 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Gm45006-201ENSMUST00000206078 690 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Gm34272-201ENSMUST00000208886 253 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Gm18387-201ENSMUST00000220333 702 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Mir28a-201ENSMUST00000083560 86 ntBASIC4.84□□□□□ -1.63
Smc1aQ9CU62 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Smc1aQ9CU62 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
Smc1aQ9CU62 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Smc1aQ9CU62 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.84□□□□□ -1.64
Smc1aQ9CU62 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm12757-201ENSMUST00000119465 800 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm5942-201ENSMUST00000120046 439 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm15019-201ENSMUST00000120148 434 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm14649-201ENSMUST00000121814 324 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm23960-201ENSMUST00000157206 131 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm25264-201ENSMUST00000158519 117 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Samd15-201ENSMUST00000169669 1194 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm19807-201ENSMUST00000173971 667 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm27254-201ENSMUST00000183926 517 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm6802-202ENSMUST00000186566 126 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm42539-201ENSMUST00000197009 308 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm43308-201ENSMUST00000197236 373 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm42999-201ENSMUST00000198049 786 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm44389-201ENSMUST00000203795 182 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms