Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm44594-201ENSMUST00000208982 407 ntBASIC3.81□□□□□ -1.8
Cdh23Q99PF4 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.81□□□□□ -1.8
Cdh23Q99PF4 Gm18225-201ENSMUST00000216708 742 ntBASIC3.81□□□□□ -1.8
Cdh23Q99PF4 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cdh23Q99PF4 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cdh23Q99PF4 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdh23Q99PF4 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cdh23Q99PF4 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cdh23Q99PF4 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdh23Q99PF4 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cdh23Q99PF4 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
Cdh23Q99PF4 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Gm22674-201ENSMUST00000104413 131 ntBASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Gm18520-201ENSMUST00000174783 658 ntBASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Gm37250-201ENSMUST00000194919 2388 ntBASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Gm29218-205ENSMUST00000190846 615 ntBASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Gm36934-201ENSMUST00000192007 306 ntBASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Gm37288-201ENSMUST00000193963 334 ntBASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Gm45149-201ENSMUST00000206459 2172 ntBASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Gm11576-201ENSMUST00000117433 417 ntBASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Gm14861-201ENSMUST00000119451 455 ntBASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Gm18255-201ENSMUST00000211316 765 ntBASIC3.8□□□□□ -1.8
Cdh23Q99PF4 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdh23Q99PF4 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm27532-201ENSMUST00000183726 113 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Mir7009-201ENSMUST00000184519 64 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 AC154257.1-201ENSMUST00000224811 1525 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm9157-201ENSMUST00000117673 225 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm24780-201ENSMUST00000157635 143 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm29588-201ENSMUST00000185738 298 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm28113-201ENSMUST00000188280 229 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm43586-201ENSMUST00000195948 310 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm43211-201ENSMUST00000196901 1899 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm19514-201ENSMUST00000206856 4489 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm26100-201ENSMUST00000157245 127 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm45400-201ENSMUST00000211603 653 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cdh23Q99PF4 Gm37056-201ENSMUST00000192141 1865 ntBASIC3.78□□□□□ -1.8
Cdh23Q99PF4 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC3.78□□□□□ -1.8
Cdh23Q99PF4 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Cdh23Q99PF4 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Cdh23Q99PF4 Gm11869-201ENSMUST00000118701 329 ntBASIC3.78□□□□□ -1.8
Cdh23Q99PF4 Gm13677-201ENSMUST00000120739 595 ntBASIC3.78□□□□□ -1.8
Cdh23Q99PF4 Gm24019-201ENSMUST00000178620 107 ntBASIC3.78□□□□□ -1.8
Cdh23Q99PF4 Gm26243-201ENSMUST00000179260 107 ntBASIC3.78□□□□□ -1.8
Cdh23Q99PF4 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.78□□□□□ -1.8
Cdh23Q99PF4 AC174776.1-201ENSMUST00000221509 405 ntBASIC3.78□□□□□ -1.8
Cdh23Q99PF4 AC174776.2-201ENSMUST00000222561 405 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms