Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clp1Q99LI9 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.14□□□□□ -1.43
Clp1Q99LI9 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Clp1Q99LI9 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Clp1Q99LI9 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Clp1Q99LI9 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Clp1Q99LI9 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Clp1Q99LI9 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Clp1Q99LI9 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.14□□□□□ -1.43
Clp1Q99LI9 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Mir711-201ENSMUST00000102188 82 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Mir450-2-201ENSMUST00000102444 69 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Mir193b-201ENSMUST00000103784 79 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm14995-201ENSMUST00000117135 391 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm12732-201ENSMUST00000121688 180 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm23332-201ENSMUST00000157424 275 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm23965-201ENSMUST00000157969 142 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm22312-201ENSMUST00000158005 130 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm26468-201ENSMUST00000158644 106 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm16566-201ENSMUST00000160387 910 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm17153-201ENSMUST00000171314 490 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Mir6343-201ENSMUST00000183584 84 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm2950-201ENSMUST00000185530 520 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm36983-201ENSMUST00000192280 1102 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm6520-201ENSMUST00000200636 410 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm44307-201ENSMUST00000204466 764 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm44134-202ENSMUST00000204777 545 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm18904-201ENSMUST00000218756 329 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 AC157570.3-201ENSMUST00000219281 205 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 AC153870.1-201ENSMUST00000219599 560 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm7822-201ENSMUST00000222433 581 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 AC121978.1-201ENSMUST00000228357 380 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clp1Q99LI9 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm37509-201ENSMUST00000194867 3169 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.13□□□□□ -1.43
Clp1Q99LI9 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.13□□□□□ -1.43
Clp1Q99LI9 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Clp1Q99LI9 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clp1Q99LI9 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm14382-201ENSMUST00000117374 437 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clp1Q99LI9 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm23206-201ENSMUST00000122720 184 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm22945-201ENSMUST00000158557 157 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Mir5103-201ENSMUST00000175111 79 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm26318-201ENSMUST00000176507 96 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm24418-201ENSMUST00000177597 79 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm24639-201ENSMUST00000178518 79 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm23076-201ENSMUST00000179082 79 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm25077-201ENSMUST00000179157 79 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm28785-201ENSMUST00000187478 379 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm18403-201ENSMUST00000192907 529 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm43043-201ENSMUST00000196579 412 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm44989-201ENSMUST00000204749 217 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Gm8231-201ENSMUST00000221617 783 ntBASIC6.12□□□□□ -1.43
Clp1Q99LI9 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Clp1Q99LI9 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms