Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.21□□□□□ -1.41
Pcdhb7Q8CDY9 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.41
Pcdhb7Q8CDY9 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Pcdhb7Q8CDY9 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.41
Pcdhb7Q8CDY9 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.21□□□□□ -1.41
Pcdhb7Q8CDY9 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.21□□□□□ -1.41
Pcdhb7Q8CDY9 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm11799-201ENSMUST00000116110 460 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm13428-201ENSMUST00000117540 365 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm11445-201ENSMUST00000119101 532 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm6584-201ENSMUST00000119671 447 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm11227-201ENSMUST00000119774 471 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm14765-201ENSMUST00000121954 326 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm12504-202ENSMUST00000148026 306 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm23411-201ENSMUST00000157988 62 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm24359-201ENSMUST00000158418 221 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm22548-201ENSMUST00000174899 78 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm27490-201ENSMUST00000184754 128 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Ighv2-8-201ENSMUST00000193935 262 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Ighv1-29-201ENSMUST00000194116 342 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm42776-201ENSMUST00000198031 406 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm43214-201ENSMUST00000199242 352 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm45365-201ENSMUST00000209489 256 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm9309-201ENSMUST00000223537 546 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 AC147633.1-201ENSMUST00000225134 259 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.21□□□□□ -1.42
Pcdhb7Q8CDY9 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm45483-201ENSMUST00000209845 1682 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 AW046200-203ENSMUST00000211787 2479 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm22284-201ENSMUST00000104132 132 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm7494-201ENSMUST00000121248 441 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm22276-201ENSMUST00000122469 129 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm6081-201ENSMUST00000134472 489 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm23954-201ENSMUST00000157213 353 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm17907-201ENSMUST00000173150 710 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm27024-201ENSMUST00000182561 755 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm8860-201ENSMUST00000193160 445 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm8929-201ENSMUST00000197781 1132 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm43415-201ENSMUST00000201934 750 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm8039-201ENSMUST00000204758 712 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm4587-201ENSMUST00000209135 637 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm33312-201ENSMUST00000222443 332 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm26225-201ENSMUST00000082508 135 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.2□□□□□ -1.42
Pcdhb7Q8CDY9 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms