Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm5321-201ENSMUST00000072050 447 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Mir143-201ENSMUST00000083511 63 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Gm37668-201ENSMUST00000193745 1944 ntBASIC6.58□□□□□ -1.36
Trim47Q8C0E3 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm11898-201ENSMUST00000117161 385 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm13378-201ENSMUST00000117483 336 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm14541-201ENSMUST00000118985 157 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm11881-201ENSMUST00000119408 572 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm15490-201ENSMUST00000119894 387 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm6067-201ENSMUST00000121648 491 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm23191-201ENSMUST00000179147 107 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm43739-201ENSMUST00000198294 307 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm43436-201ENSMUST00000199308 147 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm7721-201ENSMUST00000200446 546 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm7181-201ENSMUST00000202197 434 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm44219-201ENSMUST00000203005 273 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm8423-201ENSMUST00000211387 607 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Trim47Q8C0E3 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim47Q8C0E3 AC139638.1-201ENSMUST00000218027 364 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm18116-201ENSMUST00000220920 537 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 CT571268.1-201ENSMUST00000222320 407 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 AL589742.1-201ENSMUST00000226034 349 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm25579-201ENSMUST00000083407 106 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Gm37652-201ENSMUST00000195290 2095 ntBASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Trim47Q8C0E3 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Mir883a-201ENSMUST00000104824 76 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm5073-201ENSMUST00000118222 820 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm6797-201ENSMUST00000119440 512 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm15959-201ENSMUST00000121724 368 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm23539-201ENSMUST00000157537 224 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm25459-201ENSMUST00000157953 114 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm25439-201ENSMUST00000158280 131 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm22765-201ENSMUST00000158371 128 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm45157-201ENSMUST00000208729 401 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm9318-201ENSMUST00000222444 438 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Gm26206-201ENSMUST00000082908 110 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim47Q8C0E3 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.56□□□□□ -1.36
Trim47Q8C0E3 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 AC121598.3-201ENSMUST00000227179 1643 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm15331-201ENSMUST00000120225 385 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm14578-201ENSMUST00000122166 391 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm15212-201ENSMUST00000122403 466 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm25341-201ENSMUST00000157461 268 ntBASIC6.55□□□□□ -1.36
Trim47Q8C0E3 Gm24719-201ENSMUST00000157520 110 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 122.1 ms