Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm22991-201ENSMUST00000178126 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm25754-201ENSMUST00000178653 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm22419-201ENSMUST00000178780 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm24802-201ENSMUST00000178897 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm25208-201ENSMUST00000178964 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm24567-201ENSMUST00000179294 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm23943-201ENSMUST00000179712 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm25228-201ENSMUST00000180121 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm23304-201ENSMUST00000180209 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Mir6343-201ENSMUST00000183584 84 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm8823-201ENSMUST00000193158 433 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 AC132384.9-201ENSMUST00000218085 277 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 AC131677.1-201ENSMUST00000218721 535 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm24706-201ENSMUST00000082806 137 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim56Q80VI1 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm24235-201ENSMUST00000104319 129 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm14575-201ENSMUST00000117210 560 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm15175-201ENSMUST00000117629 132 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm6893-201ENSMUST00000118385 522 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm13349-201ENSMUST00000118436 411 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm12891-201ENSMUST00000119358 240 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm11890-201ENSMUST00000119585 417 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm11438-201ENSMUST00000121582 189 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm22261-201ENSMUST00000158691 324 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm2343-201ENSMUST00000161177 1042 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm16134-201ENSMUST00000161714 336 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm17946-201ENSMUST00000186856 538 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm5285-201ENSMUST00000193089 666 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm43070-201ENSMUST00000196938 415 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Igkv3-8-201ENSMUST00000197635 339 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm45063-201ENSMUST00000203726 472 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm44989-201ENSMUST00000204749 217 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm18924-201ENSMUST00000211929 316 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC6.25□□□□□ -1.41
Trim56Q80VI1 AC160031.1-201ENSMUST00000219914 522 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 AC154576.2-203ENSMUST00000224736 253 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 CT025602.1-201ENSMUST00000227281 382 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trim56Q80VI1 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim56Q80VI1 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm37630-201ENSMUST00000194210 1456 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Trim56Q80VI1 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm42702-201ENSMUST00000199515 4217 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm9577-201ENSMUST00000174655 2620 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Gm37607-201ENSMUST00000194925 2623 ntBASIC6.25□□□□□ -1.41
Trim56Q80VI1 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm18186-201ENSMUST00000192239 1580 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm26300-201ENSMUST00000102282 94 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm7071-201ENSMUST00000120458 462 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm5287-201ENSMUST00000120666 598 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm15786-201ENSMUST00000121079 450 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 n-R5s174-201ENSMUST00000122638 121 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Gm26352-201ENSMUST00000158223 125 ntBASIC6.24□□□□□ -1.41
Trim56Q80VI1 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms