Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm18791-201ENSMUST00000204611 726 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm44002-201ENSMUST00000205134 594 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm8319-201ENSMUST00000205708 641 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm18410-201ENSMUST00000207199 577 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Mir466n-201ENSMUST00000104798 94 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm11971-201ENSMUST00000117715 288 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm12039-201ENSMUST00000118219 180 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm15772-201ENSMUST00000118533 438 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm14506-201ENSMUST00000121165 536 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm15905-201ENSMUST00000137042 298 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm23964-201ENSMUST00000157966 107 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm29259-201ENSMUST00000186396 694 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm28648-201ENSMUST00000190092 343 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm7142-201ENSMUST00000194232 586 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm7034-201ENSMUST00000218638 645 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm18388-201ENSMUST00000222339 557 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 AC121960.3-201ENSMUST00000227077 623 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.81□□□□□ -1.64
Ubfd1Q78JW9 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm37244-201ENSMUST00000191748 1981 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Mir467h-201ENSMUST00000116759 121 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm14677-201ENSMUST00000117866 486 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm11325-201ENSMUST00000119967 469 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm24931-201ENSMUST00000158324 107 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm23046-201ENSMUST00000158369 284 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm21991-201ENSMUST00000180006 508 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms