Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm25565-201ENSMUST00000104605 105 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm13451-201ENSMUST00000117649 592 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm12901-201ENSMUST00000118690 532 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm23579-201ENSMUST00000158528 103 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Scarna10-201ENSMUST00000158992 325 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm6673-201ENSMUST00000166114 700 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm25243-201ENSMUST00000174912 207 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm29124-201ENSMUST00000186576 452 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm28069-201ENSMUST00000189926 214 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm37961-201ENSMUST00000192729 299 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm37743-201ENSMUST00000194645 376 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm8747-201ENSMUST00000195392 751 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm6719-201ENSMUST00000202067 335 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm18258-201ENSMUST00000210413 542 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 LOC665443-201ENSMUST00000212284 796 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 AL669916.3-201ENSMUST00000213855 94 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 AL669916.6-201ENSMUST00000214610 94 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 AL669916.4-201ENSMUST00000215976 94 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 AL669916.1-201ENSMUST00000217640 94 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm22265-201ENSMUST00000082947 116 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm23679-201ENSMUST00000083161 119 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 AC162910.1-201ENSMUST00000221219 1723 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm13770-201ENSMUST00000117149 305 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm8202-201ENSMUST00000117682 310 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Clec2f-201ENSMUST00000121051 374 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm11805-201ENSMUST00000121238 600 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm25184-201ENSMUST00000157753 163 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm4134-201ENSMUST00000173244 563 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Mir3095-201ENSMUST00000175552 87 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm29231-201ENSMUST00000179850 319 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm27037-201ENSMUST00000182270 960 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm27004-201ENSMUST00000183300 727 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm27190-201ENSMUST00000184890 542 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm28408-201ENSMUST00000191557 463 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm44431-201ENSMUST00000203500 413 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm44161-201ENSMUST00000203532 253 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm44604-201ENSMUST00000205475 496 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm45700-201ENSMUST00000205866 347 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm45082-201ENSMUST00000206082 601 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm45157-201ENSMUST00000208729 401 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm16335-201ENSMUST00000077495 309 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Mir375-201ENSMUST00000083682 64 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sh3rf1Q69ZI1 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms