Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm27940-201ENSMUST00000184449 98 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 Gm19131-201ENSMUST00000203408 789 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim28Q62318 CT030194.2-201ENSMUST00000225752 379 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim28Q62318 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trim28Q62318 Gm6863-201ENSMUST00000052882 636 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 Mir129-2-201ENSMUST00000083577 90 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim28Q62318 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
Trim28Q62318 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
Trim28Q62318 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trim28Q62318 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.99□□□□□ -1.45
Trim28Q62318 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim28Q62318 AC149294.7-201ENSMUST00000227475 1432 ntBASIC5.99□□□□□ -1.45
Trim28Q62318 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim28Q62318 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim28Q62318 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim28Q62318 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Trim28Q62318 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Trim28Q62318 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim28Q62318 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim28Q62318 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim28Q62318 Gm9836-201ENSMUST00000117132 216 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Gm11845-201ENSMUST00000117886 327 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Gm7312-201ENSMUST00000118798 469 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Gm8080-201ENSMUST00000122046 1155 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Gm14122-201ENSMUST00000122076 973 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.98□□□□□ -1.45
Trim28Q62318 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.98□□□□□ -1.45
Trim28Q62318 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC5.98□□□□□ -1.45
Trim28Q62318 Gm24198-201ENSMUST00000157812 108 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Gm23633-201ENSMUST00000175293 119 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim28Q62318 Gm13249-201ENSMUST00000177803 345 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim28Q62318 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim28Q62318 Gm13144-201ENSMUST00000179385 345 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim28Q62318 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim28Q62318 Gm18775-201ENSMUST00000190763 586 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Gm8823-201ENSMUST00000193158 433 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Trim28Q62318 Gm17811-201ENSMUST00000206193 387 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 AC118733.1-201ENSMUST00000217387 1217 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC5.98□□□□□ -1.45
Trim28Q62318 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC5.98□□□□□ -1.45
Trim28Q62318 CT030166.1-201ENSMUST00000222654 357 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim28Q62318 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Trim28Q62318 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim28Q62318 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Trim28Q62318 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim28Q62318 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.98□□□□□ -1.45
Trim28Q62318 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim28Q62318 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim28Q62318 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim28Q62318 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim28Q62318 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim28Q62318 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim28Q62318 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim28Q62318 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim28Q62318 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim28Q62318 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim28Q62318 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim28Q62318 Gm14750-201ENSMUST00000118262 516 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm2003-201ENSMUST00000118537 636 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm14688-201ENSMUST00000119169 303 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm14067-201ENSMUST00000119340 314 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm1989-201ENSMUST00000126244 636 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim28Q62318 Gm22793-201ENSMUST00000157227 330 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm26347-201ENSMUST00000157526 131 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm25669-201ENSMUST00000157699 112 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm23638-201ENSMUST00000175073 126 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm23158-201ENSMUST00000175076 126 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm22907-201ENSMUST00000175198 126 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm22625-201ENSMUST00000175382 126 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm22875-201ENSMUST00000175449 126 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm25197-201ENSMUST00000175516 126 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Trim28Q62318 Gm27857-201ENSMUST00000176930 126 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm26268-201ENSMUST00000177685 126 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm23681-201ENSMUST00000178821 126 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm28637-201ENSMUST00000179424 345 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim28Q62318 Gm28489-201ENSMUST00000186655 316 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm20832-201ENSMUST00000189076 665 ntBASIC5.97□□□□□ -1.45
Trim28Q62318 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms