Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm21735-201ENSMUST00000190360 696 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm43078-201ENSMUST00000197222 168 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm44274-201ENSMUST00000203417 256 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm45189-201ENSMUST00000208567 363 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm44959-201ENSMUST00000209127 231 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm8523-201ENSMUST00000211386 552 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC4.83□□□□□ -1.64
Col8a1Q00780 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC4.83□□□□□ -1.64
Col8a1Q00780 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col8a1Q00780 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm42923-201ENSMUST00000198438 2896 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col8a1Q00780 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col8a1Q00780 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm9239-201ENSMUST00000186942 2557 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm42798-201ENSMUST00000200853 3972 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Gm45577-201ENSMUST00000210206 2287 ntBASIC4.83□□□□□ -1.64
Col8a1Q00780 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
Col8a1Q00780 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm45633-201ENSMUST00000210669 3253 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Col8a1Q00780 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm37056-201ENSMUST00000192141 1865 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col8a1Q00780 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm24469-201ENSMUST00000104487 131 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm23653-201ENSMUST00000116751 97 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm6134-201ENSMUST00000117265 171 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm14987-201ENSMUST00000117820 676 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm9059-201ENSMUST00000118319 183 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm6923-201ENSMUST00000118343 406 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm11761-201ENSMUST00000121392 445 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm25428-201ENSMUST00000157608 114 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm22842-201ENSMUST00000157709 118 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm26310-201ENSMUST00000157766 117 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm16101-201ENSMUST00000160695 430 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm20519-201ENSMUST00000173684 359 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm22621-201ENSMUST00000179678 74 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm27640-201ENSMUST00000184580 147 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC4.82□□□□□ -1.64
Col8a1Q00780 Trbv12-3-201ENSMUST00000192675 372 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm6510-201ENSMUST00000195916 574 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm44219-201ENSMUST00000203005 273 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC4.82□□□□□ -1.64
Col8a1Q00780 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm23851-201ENSMUST00000083831 103 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC4.82□□□□□ -1.64
Col8a1Q00780 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Col8a1Q00780 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col8a1Q00780 Fam26d-202ENSMUST00000218239 3075 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC4.82□□□□□ -1.64
Col8a1Q00780 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col8a1Q00780 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC4.82□□□□□ -1.64
Col8a1Q00780 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col8a1Q00780 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC4.81□□□□□ -1.64
Col8a1Q00780 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms